28 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_01296	Mitochondrial import protein MMP37. (553 aa)
	VDBG_01725	COQ7. (69 aa)
	VDBG_01954	Uncharacterized protein. (371 aa)
	VDBG_02027	COQ4. (162 aa)
	VDBG_03289	Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family. (451 aa)
	VDBG_03685	Tumor suppressor candidate 4. (436 aa)
	VDBG_04316	Uncharacterized protein. (107 aa)
	COQ6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. (493 aa)
	VDBG_04412	Chaperone protein dnaJ. (549 aa)
	VDBG_05123	Predicted protein. (151 aa)
	VDBG_05351	Predicted protein. (577 aa)
	VDBG_07363	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (173 aa)
	VDBG_07451	Uncharacterized protein. (851 aa)
	VDBG_07495	Methyltransf_25 domain-containing protein. (274 aa)
	VDBG_07908	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE. (228 aa)
	VDBG_08067	Hexaprenyldihydroxybenzoate methyltransferase. (336 aa)
	VDBG_08676	Erf4 domain-containing protein. (749 aa)
	VDBG_08766	MSS51. (302 aa)
	VDBG_08783	Peroxin 8. (689 aa)
	VDBG_09689	Vacuole morphology and inheritance protein. (894 aa)
	VDBG_00593	Predicted protein. (123 aa)
	VDBG_00030	Msp1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (893 aa)
	VDBG_00068	ABC1. (161 aa)
	VDBG_00069	ABC1 protein. (451 aa)
	VDBG_00116	FAD-binding FR-type domain-containing protein. (243 aa)
	VDBG_00117	FMI1 protein. (378 aa)
	VDBG_02123	Uncharacterized protein. (254 aa)
	VDBG_01566	Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (130 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COQ6	VDBG_00068	C9SI24	C9S8K0	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	ABC1.	0.577
COQ6	VDBG_00069	C9SI24	C9S8K1	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	ABC1 protein.	0.577
COQ6	VDBG_01725	C9SI24	C9SB66	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	COQ7.	0.652
COQ6	VDBG_02027	C9SI24	C9SC34	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	COQ4.	0.651
COQ6	VDBG_03289	C9SI24	C9SDR0	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.	0.632
COQ6	VDBG_07908	C9SI24	C9SSN3	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE.	0.973
COQ6	VDBG_08067	C9SI24	C9ST42	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	Hexaprenyldihydroxybenzoate methyltransferase.	0.863
VDBG_00068	COQ6	C9S8K0	C9SI24	ABC1.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	0.577
VDBG_00068	VDBG_00069	C9S8K0	C9S8K1	ABC1.	ABC1 protein.	0.940
VDBG_00068	VDBG_01725	C9S8K0	C9SB66	ABC1.	COQ7.	0.579
VDBG_00068	VDBG_02027	C9S8K0	C9SC34	ABC1.	COQ4.	0.523
VDBG_00068	VDBG_03289	C9S8K0	C9SDR0	ABC1.	Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.	0.490
VDBG_00068	VDBG_05351	C9S8K0	C9SKM4	ABC1.	Predicted protein.	0.499
VDBG_00068	VDBG_07495	C9S8K0	C9SRH0	ABC1.	Methyltransf_25 domain-containing protein.	0.499
VDBG_00068	VDBG_07908	C9S8K0	C9SSN3	ABC1.	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE.	0.692
VDBG_00068	VDBG_08067	C9S8K0	C9ST42	ABC1.	Hexaprenyldihydroxybenzoate methyltransferase.	0.715
VDBG_00069	COQ6	C9S8K1	C9SI24	ABC1 protein.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.	0.577
VDBG_00069	VDBG_00068	C9S8K1	C9S8K0	ABC1 protein.	ABC1.	0.940
VDBG_00069	VDBG_01725	C9S8K1	C9SB66	ABC1 protein.	COQ7.	0.579
VDBG_00069	VDBG_02027	C9S8K1	C9SC34	ABC1 protein.	COQ4.	0.523