11 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_04419	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family. (232 aa)
	VDBG_06762	Heat shock protein HSP98; Belongs to the ClpA/ClpB family. (921 aa)
	VDBG_07485	Trehalose-phosphatase. (604 aa)
	VDBG_09407	Heat shock protein. (651 aa)
	VDBG_09408	Flavin_Reduct domain-containing protein. (267 aa)
	VDBG_05130	RPOL4c domain-containing protein. (160 aa)
	VDBG_03081	Alpha,alpha-trehalose-phosphate synthase. (578 aa)
	VDBG_03483	Uncharacterized protein. (383 aa)
	VDBG_04226	Predicted protein. (107 aa)
	VDBG_04686	Cutinase G-box binding protein. (572 aa)
	VDBG_04825	Heat shock protein. (744 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_03081	VDBG_03483	C9SD07	C9SFX0	Alpha,alpha-trehalose-phosphate synthase.	Uncharacterized protein.	0.407
VDBG_03081	VDBG_04419	C9SD07	C9SJE8	Alpha,alpha-trehalose-phosphate synthase.	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	0.407
VDBG_03081	VDBG_04825	C9SD07	C9SIE3	Alpha,alpha-trehalose-phosphate synthase.	Heat shock protein.	0.411
VDBG_03081	VDBG_06762	C9SD07	C9SPD7	Alpha,alpha-trehalose-phosphate synthase.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.473
VDBG_03081	VDBG_07485	C9SD07	C9SRG0	Alpha,alpha-trehalose-phosphate synthase.	Trehalose-phosphatase.	0.998
VDBG_03483	VDBG_03081	C9SFX0	C9SD07	Uncharacterized protein.	Alpha,alpha-trehalose-phosphate synthase.	0.407
VDBG_03483	VDBG_04825	C9SFX0	C9SIE3	Uncharacterized protein.	Heat shock protein.	0.743
VDBG_03483	VDBG_06762	C9SFX0	C9SPD7	Uncharacterized protein.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.773
VDBG_03483	VDBG_09407	C9SFX0	C9SXA7	Uncharacterized protein.	Heat shock protein.	0.526
VDBG_03483	VDBG_09408	C9SFX0	C9SXA8	Uncharacterized protein.	Flavin_Reduct domain-containing protein.	0.526
VDBG_04226	VDBG_09407	C9SGG7	C9SXA7	Predicted protein.	Heat shock protein.	0.506
VDBG_04226	VDBG_09408	C9SGG7	C9SXA8	Predicted protein.	Flavin_Reduct domain-containing protein.	0.506
VDBG_04419	VDBG_03081	C9SJE8	C9SD07	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	Alpha,alpha-trehalose-phosphate synthase.	0.407
VDBG_04419	VDBG_04825	C9SJE8	C9SIE3	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	Heat shock protein.	0.743
VDBG_04419	VDBG_06762	C9SJE8	C9SPD7	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.773
VDBG_04419	VDBG_09407	C9SJE8	C9SXA7	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	Heat shock protein.	0.526
VDBG_04419	VDBG_09408	C9SJE8	C9SXA8	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	Flavin_Reduct domain-containing protein.	0.526
VDBG_04825	VDBG_03081	C9SIE3	C9SD07	Heat shock protein.	Alpha,alpha-trehalose-phosphate synthase.	0.411
VDBG_04825	VDBG_03483	C9SIE3	C9SFX0	Heat shock protein.	Uncharacterized protein.	0.743
VDBG_04825	VDBG_04419	C9SIE3	C9SJE8	Heat shock protein.	30 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.	0.743