STRINGSTRING
VDBG_08380 VDBG_08380 VDBG_07582 VDBG_07582 VDBG_03913 VDBG_03913 VDBG_03910 VDBG_03910 VDBG_03162 VDBG_03162 VDBG_03113 VDBG_03113 VDBG_09762 VDBG_09762 VDBG_08383 VDBG_08383 VDBG_08382 VDBG_08382 VDBG_07893 VDBG_07893
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_08380HC-toxin synthetase. (2879 aa)
VDBG_07582NADPH dehydrogenase. (390 aa)
VDBG_03913NADPH dehydrogenase. (368 aa)
VDBG_03910Uncharacterized protein. (262 aa)
VDBG_03162Glucans biosynthesis glucosyltransferase H. (546 aa)
VDBG_0311312-oxophytodienoate reductase. (355 aa)
VDBG_09762Trichothecene 3-O-acetyltransferase. (436 aa)
VDBG_08383Phenyloxazoline synthase mbtB. (781 aa)
VDBG_08382HC-toxin synthetase. (2455 aa)
VDBG_0789312-oxophytodienoate reductase. (411 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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