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VDBG_00556 VDBG_00556 VDBG_00699 VDBG_00699 VDBG_00829 VDBG_00829 VDBG_03407 VDBG_03407 VDBG_04825 VDBG_04825 VDBG_04412 VDBG_04412 VDBG_05208 VDBG_05208 VDBG_05260 VDBG_05260 VDBG_05412 VDBG_05412 VDBG_06645 VDBG_06645 VDBG_06762 VDBG_06762 VDBG_07946 VDBG_07946 VDBG_08798 VDBG_08798
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00556Chaperone protein dnaJ. (337 aa)
VDBG_00699Chaperone protein dnaK; Belongs to the heat shock protein 70 family. (564 aa)
VDBG_00829Heat shock protein SSC1; Belongs to the heat shock protein 70 family. (651 aa)
VDBG_03407ATP-dependent Clp protease ATP-binding subunit clpX. (583 aa)
VDBG_04825Heat shock protein. (744 aa)
VDBG_04412Chaperone protein dnaJ. (549 aa)
VDBG_05208Heat shock protein; Belongs to the chaperonin (HSP60) family. (586 aa)
VDBG_05260Hsp70-like protein; Belongs to the heat shock protein 70 family. (651 aa)
VDBG_05412GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (247 aa)
VDBG_06645Chaperone protein dnaJ 2. (421 aa)
VDBG_06762Heat shock protein HSP98; Belongs to the ClpA/ClpB family. (921 aa)
VDBG_07946Hsp70-like protein; Belongs to the heat shock protein 70 family. (666 aa)
VDBG_08798Small glutamine-rich tetratricopeptide repeat-containing protein A. (697 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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