13 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00556	Chaperone protein dnaJ. (337 aa)
	VDBG_00699	Chaperone protein dnaK; Belongs to the heat shock protein 70 family. (564 aa)
	VDBG_00829	Heat shock protein SSC1; Belongs to the heat shock protein 70 family. (651 aa)
	VDBG_03407	ATP-dependent Clp protease ATP-binding subunit clpX. (583 aa)
	VDBG_04825	Heat shock protein. (744 aa)
	VDBG_04412	Chaperone protein dnaJ. (549 aa)
	VDBG_05208	Heat shock protein; Belongs to the chaperonin (HSP60) family. (586 aa)
	VDBG_05260	Hsp70-like protein; Belongs to the heat shock protein 70 family. (651 aa)
	VDBG_05412	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (247 aa)
	VDBG_06645	Chaperone protein dnaJ 2. (421 aa)
	VDBG_06762	Heat shock protein HSP98; Belongs to the ClpA/ClpB family. (921 aa)
	VDBG_07946	Hsp70-like protein; Belongs to the heat shock protein 70 family. (666 aa)
	VDBG_08798	Small glutamine-rich tetratricopeptide repeat-containing protein A. (697 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00556	VDBG_00699	C9S6D6	C9S6Y0	Chaperone protein dnaJ.	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	0.703
VDBG_00556	VDBG_00829	C9S6D6	C9S7F9	Chaperone protein dnaJ.	Heat shock protein SSC1; Belongs to the heat shock protein 70 family.	0.742
VDBG_00556	VDBG_04825	C9S6D6	C9SIE3	Chaperone protein dnaJ.	Heat shock protein.	0.486
VDBG_00556	VDBG_05208	C9S6D6	C9SK81	Chaperone protein dnaJ.	Heat shock protein; Belongs to the chaperonin (HSP60) family.	0.411
VDBG_00556	VDBG_05260	C9S6D6	C9SKD3	Chaperone protein dnaJ.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.708
VDBG_00556	VDBG_05412	C9S6D6	C9SKT5	Chaperone protein dnaJ.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.531
VDBG_00556	VDBG_06762	C9S6D6	C9SPD7	Chaperone protein dnaJ.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.486
VDBG_00556	VDBG_07946	C9S6D6	C9SSS1	Chaperone protein dnaJ.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.923
VDBG_00699	VDBG_00556	C9S6Y0	C9S6D6	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Chaperone protein dnaJ.	0.703
VDBG_00699	VDBG_00829	C9S6Y0	C9S7F9	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Heat shock protein SSC1; Belongs to the heat shock protein 70 family.	0.620
VDBG_00699	VDBG_04412	C9S6Y0	C9SJE1	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Chaperone protein dnaJ.	0.726
VDBG_00699	VDBG_04825	C9S6Y0	C9SIE3	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Heat shock protein.	0.677
VDBG_00699	VDBG_05208	C9S6Y0	C9SK81	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Heat shock protein; Belongs to the chaperonin (HSP60) family.	0.650
VDBG_00699	VDBG_05412	C9S6Y0	C9SKT5	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.695
VDBG_00699	VDBG_06645	C9S6Y0	C9SP20	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Chaperone protein dnaJ 2.	0.840
VDBG_00699	VDBG_06762	C9S6Y0	C9SPD7	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.738
VDBG_00699	VDBG_07946	C9S6Y0	C9SSS1	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.725
VDBG_00699	VDBG_08798	C9S6Y0	C9SV73	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	Small glutamine-rich tetratricopeptide repeat-containing protein A.	0.530
VDBG_00829	VDBG_00556	C9S7F9	C9S6D6	Heat shock protein SSC1; Belongs to the heat shock protein 70 family.	Chaperone protein dnaJ.	0.742
VDBG_00829	VDBG_00699	C9S7F9	C9S6Y0	Heat shock protein SSC1; Belongs to the heat shock protein 70 family.	Chaperone protein dnaK; Belongs to the heat shock protein 70 family.	0.620