12 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_08696	Pyruvate dehydrogenase E1 component subunit alpha. (417 aa)
	VDBG_01594	Acetolactate synthase small subunit. (314 aa)
	VDBG_00302	Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (378 aa)
	VDBG_03409	2-oxoglutarate dehydrogenase E1. (920 aa)
	VDBG_04619	DNA polymerase IV. (563 aa)
	VDBG_05083	Dihydrolipoamide succinyltransferase. (139 aa)
	VDBG_01915	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (372 aa)
	VDBG_09873	Uncharacterized protein. (311 aa)
	VDBG_09200	Mitochondrial genome maintenance protein mgm101. (293 aa)
	VDBG_08678	Uncharacterized protein. (138 aa)
	VDBG_02557	L-serine dehydratase. (364 aa)
	VDBG_04618	MUS42. (171 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00302	VDBG_01594	C9S595	C9SAN7	Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.	Acetolactate synthase small subunit.	0.967
VDBG_01594	VDBG_00302	C9SAN7	C9S595	Acetolactate synthase small subunit.	Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.	0.967
VDBG_01594	VDBG_01915	C9SAN7	C9SBS2	Acetolactate synthase small subunit.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.858
VDBG_01594	VDBG_02557	C9SAN7	C9SDW2	Acetolactate synthase small subunit.	L-serine dehydratase.	0.975
VDBG_01594	VDBG_03409	C9SAN7	C9SE53	Acetolactate synthase small subunit.	2-oxoglutarate dehydrogenase E1.	0.497
VDBG_01594	VDBG_08696	C9SAN7	C9SUX1	Acetolactate synthase small subunit.	Pyruvate dehydrogenase E1 component subunit alpha.	0.805
VDBG_01594	VDBG_09873	C9SAN7	C9SY98	Acetolactate synthase small subunit.	Uncharacterized protein.	0.761
VDBG_01915	VDBG_01594	C9SBS2	C9SAN7	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Acetolactate synthase small subunit.	0.858
VDBG_01915	VDBG_03409	C9SBS2	C9SE53	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	2-oxoglutarate dehydrogenase E1.	0.936
VDBG_01915	VDBG_05083	C9SBS2	C9SJV6	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Dihydrolipoamide succinyltransferase.	0.979
VDBG_01915	VDBG_08696	C9SBS2	C9SUX1	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Pyruvate dehydrogenase E1 component subunit alpha.	0.999
VDBG_02557	VDBG_01594	C9SDW2	C9SAN7	L-serine dehydratase.	Acetolactate synthase small subunit.	0.975
VDBG_03409	VDBG_01594	C9SE53	C9SAN7	2-oxoglutarate dehydrogenase E1.	Acetolactate synthase small subunit.	0.497
VDBG_03409	VDBG_01915	C9SE53	C9SBS2	2-oxoglutarate dehydrogenase E1.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.936
VDBG_03409	VDBG_05083	C9SE53	C9SJV6	2-oxoglutarate dehydrogenase E1.	Dihydrolipoamide succinyltransferase.	0.999
VDBG_03409	VDBG_08696	C9SE53	C9SUX1	2-oxoglutarate dehydrogenase E1.	Pyruvate dehydrogenase E1 component subunit alpha.	0.939
VDBG_04618	VDBG_04619	C9SHT6	C9SHT7	MUS42.	DNA polymerase IV.	0.900
VDBG_04619	VDBG_04618	C9SHT7	C9SHT6	DNA polymerase IV.	MUS42.	0.900
VDBG_05083	VDBG_01915	C9SJV6	C9SBS2	Dihydrolipoamide succinyltransferase.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.979
VDBG_05083	VDBG_03409	C9SJV6	C9SE53	Dihydrolipoamide succinyltransferase.	2-oxoglutarate dehydrogenase E1.	0.999