Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VDBG_00099 | VDBG_02038 | C9S8N1 | C9SC45 | Uncharacterized protein. | Uncharacterized protein. | 0.856 |
| VDBG_00099 | VDBG_08234 | C9S8N1 | C9SUL4 | Uncharacterized protein. | Paxneb protein superfamily. | 0.886 |
| VDBG_00099 | uba4 | C9S8N1 | C9SJ30 | Uncharacterized protein. | Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] | 0.400 |
| VDBG_00408 | VDBG_02038 | C9S5S5 | C9SC45 | Uncharacterized protein. | Uncharacterized protein. | 0.784 |
| VDBG_00408 | VDBG_08234 | C9S5S5 | C9SUL4 | Uncharacterized protein. | Paxneb protein superfamily. | 0.830 |
| VDBG_00408 | uba4 | C9S5S5 | C9SJ30 | Uncharacterized protein. | Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] | 0.400 |
| VDBG_00559 | VDBG_08046 | C9S6D9 | C9ST21 | Vacuolar-sorting protein snf7. | Vacuolar protein-sorting-associated protein. | 0.943 |
| VDBG_01068 | VDBG_02038 | C9S8Y6 | C9SC45 | Uncharacterized protein. | Uncharacterized protein. | 0.784 |
| VDBG_01068 | VDBG_08234 | C9S8Y6 | C9SUL4 | Uncharacterized protein. | Paxneb protein superfamily. | 0.830 |
| VDBG_01068 | uba4 | C9S8Y6 | C9SJ30 | Uncharacterized protein. | Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] | 0.400 |
| VDBG_01630 | VDBG_08400 | C9SAU7 | C9STX9 | Isovaleryl-CoA dehydrogenase. | Predicted protein. | 0.556 |
| VDBG_01630 | VDBG_09107 | C9SAU7 | C9SW32 | Isovaleryl-CoA dehydrogenase. | NAD-dependent epimerase/dehydratase. | 0.556 |
| VDBG_01914 | VDBG_02909 | C9SBS1 | C9SCI5 | Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol. | 3-beta-hydroxysteroid-Delta(8), Delta(7)-isomerase. | 0.901 |
| VDBG_01914 | VDBG_06803 | C9SBS1 | C9SPH8 | Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol. | EBDP2. | 0.901 |
| VDBG_01914 | VDBG_08910 | C9SBS1 | C9SVI5 | Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol. | Sterol 24-C-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family. | 0.902 |
| VDBG_02038 | VDBG_00099 | C9SC45 | C9S8N1 | Uncharacterized protein. | Uncharacterized protein. | 0.856 |
| VDBG_02038 | VDBG_00408 | C9SC45 | C9S5S5 | Uncharacterized protein. | Uncharacterized protein. | 0.784 |
| VDBG_02038 | VDBG_01068 | C9SC45 | C9S8Y6 | Uncharacterized protein. | Uncharacterized protein. | 0.784 |
| VDBG_02038 | VDBG_08234 | C9SC45 | C9SUL4 | Uncharacterized protein. | Paxneb protein superfamily. | 0.980 |
| VDBG_02038 | uba4 | C9SC45 | C9SJ30 | Uncharacterized protein. | Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] | 0.546 |
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