STRINGSTRING
VDBG_08046 VDBG_08046 VDBG_01542 VDBG_01542 VDBG_03061 VDBG_03061 VDBG_03062 VDBG_03062 VDBG_02594 VDBG_02594 VDBG_03953 VDBG_03953 VDBG_04960 VDBG_04960 VDBG_05141 VDBG_05141 VDBG_06420 VDBG_06420 VDBG_06626 VDBG_06626 VDBG_07980 VDBG_07980 VDBG_08128 VDBG_08128 VDBG_08650 VDBG_08650 VDBG_08711 VDBG_08711 VDBG_08856 VDBG_08856 VDBG_09176 VDBG_09176
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_08046Vacuolar protein-sorting-associated protein. (161 aa)
VDBG_01542Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (496 aa)
VDBG_03061Predicted protein. (129 aa)
VDBG_03062Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (330 aa)
VDBG_02594Aldehyde dehydrogenase. (377 aa)
VDBG_03953Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)
VDBG_04960Predicted protein. (397 aa)
VDBG_05141Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (495 aa)
VDBG_06420Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
VDBG_06626Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
VDBG_07980Catabolite repression protein creC. (389 aa)
VDBG_08128Usp domain-containing protein. (578 aa)
VDBG_08650Transcriptional repressor rco-1. (103 aa)
VDBG_08711Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
VDBG_08856Uncharacterized protein. (350 aa)
VDBG_09176Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (498 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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