(7 nodes) Purine ribonucleoside biosynthetic process network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00568	Adenosine deaminase family protein. (457 aa)
	VDBG_01972	IMP-specific 5'-nucleotidase. (75 aa)
	VDBG_06881	Adenosine kinase. (359 aa)
	VDBG_07761	Adenosine deaminase. (363 aa)
	VDBG_07914	A_deaminase domain-containing protein. (599 aa)
	VDBG_07977	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. (307 aa)
	VDBG_08412	A_deaminase domain-containing protein. (559 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00568	VDBG_06881	C9S6E8	C9SPQ6	Adenosine deaminase family protein.	Adenosine kinase.	0.946
VDBG_00568	VDBG_07761	C9S6E8	C9SS86	Adenosine deaminase family protein.	Adenosine deaminase.	0.907
VDBG_00568	VDBG_07914	C9S6E8	C9SSN9	Adenosine deaminase family protein.	A_deaminase domain-containing protein.	0.912
VDBG_00568	VDBG_07977	C9S6E8	C9SSV2	Adenosine deaminase family protein.	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	0.582
VDBG_00568	VDBG_08412	C9S6E8	C9STZ1	Adenosine deaminase family protein.	A_deaminase domain-containing protein.	0.908
VDBG_06881	VDBG_00568	C9SPQ6	C9S6E8	Adenosine kinase.	Adenosine deaminase family protein.	0.946
VDBG_06881	VDBG_07761	C9SPQ6	C9SS86	Adenosine kinase.	Adenosine deaminase.	0.958
VDBG_06881	VDBG_07914	C9SPQ6	C9SSN9	Adenosine kinase.	A_deaminase domain-containing protein.	0.946
VDBG_06881	VDBG_07977	C9SPQ6	C9SSV2	Adenosine kinase.	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	0.722
VDBG_06881	VDBG_08412	C9SPQ6	C9STZ1	Adenosine kinase.	A_deaminase domain-containing protein.	0.946
VDBG_07761	VDBG_00568	C9SS86	C9S6E8	Adenosine deaminase.	Adenosine deaminase family protein.	0.907
VDBG_07761	VDBG_06881	C9SS86	C9SPQ6	Adenosine deaminase.	Adenosine kinase.	0.958
VDBG_07761	VDBG_07914	C9SS86	C9SSN9	Adenosine deaminase.	A_deaminase domain-containing protein.	0.907
VDBG_07761	VDBG_07977	C9SS86	C9SSV2	Adenosine deaminase.	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	0.582
VDBG_07761	VDBG_08412	C9SS86	C9STZ1	Adenosine deaminase.	A_deaminase domain-containing protein.	0.907
VDBG_07914	VDBG_00568	C9SSN9	C9S6E8	A_deaminase domain-containing protein.	Adenosine deaminase family protein.	0.912
VDBG_07914	VDBG_06881	C9SSN9	C9SPQ6	A_deaminase domain-containing protein.	Adenosine kinase.	0.946
VDBG_07914	VDBG_07761	C9SSN9	C9SS86	A_deaminase domain-containing protein.	Adenosine deaminase.	0.907
VDBG_07914	VDBG_07977	C9SSN9	C9SSV2	A_deaminase domain-containing protein.	S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.	0.582
VDBG_07914	VDBG_08412	C9SSN9	C9STZ1	A_deaminase domain-containing protein.	A_deaminase domain-containing protein.	0.911