STRINGSTRING
VDBG_00977 VDBG_00977 VDBG_00241 VDBG_00241 VDBG_00253 VDBG_00253 VDBG_00255 VDBG_00255 VDBG_00264 VDBG_00264 VDBG_01172 VDBG_01172 VDBG_00664 VDBG_00664 VDBG_00670 VDBG_00670 VDBG_00748 VDBG_00748 VDBG_00749 VDBG_00749 VDBG_00769 VDBG_00769 VDBG_01339 VDBG_01339 VDBG_00841 VDBG_00841 VDBG_01420 VDBG_01420 VDBG_01439 VDBG_01439 VDBG_00075 VDBG_00075 VDBG_00096 VDBG_00096 VDBG_00103 VDBG_00103 VDBG_00114 VDBG_00114 VDBG_00115 VDBG_00115 VDBG_00146 VDBG_00146 VDBG_02098 VDBG_02098 VDBG_02114 VDBG_02114 VDBG_02196 VDBG_02196 VDBG_02390 VDBG_02390 VDBG_01481 VDBG_01481 VDBG_01577 VDBG_01577 VDBG_01591 VDBG_01591 VDBG_02470 VDBG_02470 VDBG_01688 VDBG_01688 VDBG_01760 VDBG_01760 VDBG_01938 VDBG_01938 VDBG_01952 VDBG_01952 VDBG_02915 VDBG_02915 VDBG_03173 VDBG_03173 VDBG_03204 VDBG_03204 VDBG_03355 VDBG_03355 VDBG_02654 VDBG_02654 VDBG_02806 VDBG_02806 VDBG_04005 VDBG_04005 VDBG_04007 VDBG_04007 VDBG_03449 VDBG_03449 VDBG_03454 VDBG_03454 VDBG_04179 VDBG_04179 VDBG_04180 VDBG_04180 VDBG_04188 VDBG_04188 VDBG_03568 VDBG_03568 VDBG_03626 VDBG_03626 VDBG_03634 VDBG_03634 VDBG_03636 VDBG_03636 VDBG_04270 VDBG_04270 VDBG_04308 VDBG_04308 VDBG_03756 VDBG_03756 VDBG_03802 VDBG_03802 VDBG_03803 VDBG_03803 VDBG_03812 VDBG_03812 VDBG_04550 VDBG_04550 VDBG_04577 VDBG_04577 VDBG_04676 VDBG_04676 VDBG_04689 VDBG_04689 VDBG_04690 VDBG_04690 VDBG_04711 VDBG_04711 VDBG_04818 VDBG_04818 VDBG_04826 VDBG_04826 VDBG_05043 VDBG_05043 VDBG_05048 VDBG_05048 VDBG_04395 VDBG_04395 VDBG_04438 VDBG_04438 VDBG_05093 VDBG_05093 VDBG_05164 VDBG_05164 VDBG_05173 VDBG_05173 VDBG_05187 VDBG_05187 VDBG_05330 VDBG_05330 VDBG_05337 VDBG_05337 VDBG_05369 VDBG_05369 VDBG_05402 VDBG_05402 VDBG_05437 VDBG_05437 VDBG_05455 VDBG_05455 VDBG_05556 VDBG_05556 VDBG_05574 VDBG_05574 VDBG_05671 VDBG_05671 VDBG_05731 VDBG_05731 VDBG_05879 VDBG_05879 VDBG_05880 VDBG_05880 VDBG_05882 VDBG_05882 VDBG_05902 VDBG_05902 VDBG_05903 VDBG_05903 VDBG_05936 VDBG_05936 VDBG_06245 VDBG_06245 VDBG_06275 VDBG_06275 VDBG_06276 VDBG_06276 VDBG_06446 VDBG_06446 VDBG_06683 VDBG_06683 VDBG_06729 VDBG_06729 VDBG_06739 VDBG_06739 VDBG_06744 VDBG_06744 VDBG_06808 VDBG_06808 VDBG_06890 VDBG_06890 VDBG_06899 VDBG_06899 VDBG_06900 VDBG_06900 VDBG_07147 VDBG_07147 VDBG_07194 VDBG_07194 VDBG_07408 VDBG_07408 VDBG_06951 VDBG_06951 VDBG_07458 VDBG_07458 VDBG_07483 VDBG_07483 VDBG_07614 VDBG_07614 VDBG_07657 VDBG_07657 VDBG_07927 VDBG_07927 VDBG_07960 VDBG_07960 VDBG_08219 VDBG_08219 VDBG_08321 VDBG_08321 VDBG_08344 VDBG_08344 VDBG_08355 VDBG_08355 VDBG_08501 VDBG_08501 VDBG_08551 VDBG_08551 VDBG_08600 VDBG_08600 VDBG_08633 VDBG_08633 VDBG_08655 VDBG_08655 VDBG_08714 VDBG_08714 VDBG_08815 VDBG_08815 VDBG_08912 VDBG_08912 VDBG_08946 VDBG_08946 VDBG_09193 VDBG_09193 VDBG_09322 VDBG_09322 VDBG_09354 VDBG_09354 VDBG_09359 VDBG_09359 VDBG_09368 VDBG_09368 VDBG_09684 VDBG_09684 VDBG_09723 VDBG_09723 VDBG_09725 VDBG_09725 VDBG_09743 VDBG_09743 VDBG_09758 VDBG_09758 VDBG_09968 VDBG_09968 VDBG_10196 VDBG_10196
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00977GTPase-activating protein ZNF289. (482 aa)
VDBG_00241Vacuolar protein sorting-associated protein. (925 aa)
VDBG_00253Transmembrane emp24 domain-containing protein. (219 aa)
VDBG_00255Uncharacterized protein. (134 aa)
VDBG_00264AP-1 complex subunit sigma-1. (157 aa)
VDBG_01172Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (837 aa)
VDBG_00664SSOI. (332 aa)
VDBG_00670Endoplasmic reticulum-Golgi intermediate compartment protein. (374 aa)
VDBG_00748Uncharacterized protein. (344 aa)
VDBG_00749Vps52 / Sac2 family protein. (672 aa)
VDBG_00769Protein YIP. (301 aa)
VDBG_01339Uncharacterized protein. (111 aa)
VDBG_00841Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (1059 aa)
VDBG_01420Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (841 aa)
VDBG_01439Bud site selection protein. (687 aa)
VDBG_00075ERP3. (210 aa)
VDBG_00096Transport protein sec22; Belongs to the synaptobrevin family. (217 aa)
VDBG_00103Hypercellular protein. (1205 aa)
VDBG_00114Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1654 aa)
VDBG_00115Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1045 aa)
VDBG_00146Sec8 exocyst complex component specific domain-containing protein. (1104 aa)
VDBG_02098Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (896 aa)
VDBG_02114SEC1 family transport protein SLY1; Belongs to the STXBP/unc-18/SEC1 family. (707 aa)
VDBG_02196Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (511 aa)
VDBG_02390SVP26. (119 aa)
VDBG_01481Intracellular protein transport protein USO1. (1011 aa)
VDBG_01577Vesicle transport v-SNARE protein. (230 aa)
VDBG_01591Uncharacterized protein. (335 aa)
VDBG_02470Uncharacterized protein. (1517 aa)
VDBG_01688Transport protein yif1. (325 aa)
VDBG_01760Chitin biosynthesis protein CHS5. (166 aa)
VDBG_01938Syntaxin-5. (312 aa)
VDBG_01952Sorting nexin-3. (182 aa)
VDBG_02915DUF1741 domain-containing protein. (338 aa)
VDBG_03173Secreted glucosidase. (151 aa)
VDBG_03204Uncharacterized protein. (356 aa)
VDBG_03355Uncharacterized protein. (822 aa)
VDBG_02654V-SNARE. (284 aa)
VDBG_02806L-type lectin-like domain-containing protein. (329 aa)
VDBG_04005Geranylgeranyl transferase type-2 subunit alpha. (432 aa)
VDBG_04007V-SNARE. (284 aa)
VDBG_03449Transport protein sec24. (1054 aa)
VDBG_03454Uncharacterized protein. (183 aa)
VDBG_04179Uncharacterized protein. (35 aa)
VDBG_04180F-box protein pof6. (682 aa)
VDBG_04188AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. (971 aa)
VDBG_03568Uncharacterized protein. (40 aa)
VDBG_03626SEC14 cytosolic factor. (346 aa)
VDBG_03634Uncharacterized protein. (804 aa)
VDBG_03636RINT-1 family protein. (858 aa)
VDBG_04270Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (294 aa)
VDBG_04308Trafficking protein particle complex subunit BET3. (189 aa)
VDBG_03756Endoplasmic reticulum transmembrane protein. (211 aa)
VDBG_03802Uncharacterized protein. (186 aa)
VDBG_03803Uncharacterized protein. (138 aa)
VDBG_03812ER lumen protein retaining receptor 2. (274 aa)
VDBG_04550Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (199 aa)
VDBG_04577Sec20 domain-containing protein. (411 aa)
VDBG_04676Uncharacterized protein. (214 aa)
VDBG_04689Predicted protein. (821 aa)
VDBG_04690Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (329 aa)
VDBG_04711Endoplasmic reticulum-Golgi intermediate compartment protein. (349 aa)
VDBG_04818Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (224 aa)
VDBG_04826Endosomal protein P24B. (203 aa)
VDBG_05043PRA1 family protein. (176 aa)
VDBG_05048Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1655 aa)
VDBG_04395Cytoplasm protein. (677 aa)
VDBG_04438Uncharacterized protein. (624 aa)
VDBG_05093Uncharacterized protein. (327 aa)
VDBG_05164Synaptobrevin; Belongs to the synaptobrevin family. (205 aa)
VDBG_05173Got1 family protein. (139 aa)
VDBG_05187Transport protein SEC31. (1007 aa)
VDBG_05330GRIP domain-containing protein. (555 aa)
VDBG_05337Alkyl transferase; Belongs to the UPP synthase family. (366 aa)
VDBG_05369Het-C protein. (496 aa)
VDBG_05402Uncharacterized protein. (348 aa)
VDBG_05437Vesicular-fusion protein SEC18. (857 aa)
VDBG_05455ER lumen protein-retaining receptor. (214 aa)
VDBG_05556SNARE domain-containing protein; Belongs to the syntaxin family. (264 aa)
VDBG_05574GTPase-activating protein GYP5. (774 aa)
VDBG_05671Uncharacterized protein. (409 aa)
VDBG_05731AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (189 aa)
VDBG_05879Uncharacterized protein. (48 aa)
VDBG_05880Golgi reassembly stacking protein. (210 aa)
VDBG_05882Dopey. (1832 aa)
VDBG_05902Uncharacterized protein. (354 aa)
VDBG_05903ER-derived vesicles protein ERV29. (292 aa)
VDBG_05936Exocyst complex component protein. (727 aa)
VDBG_06245GFA domain-containing protein. (176 aa)
VDBG_06275Uncharacterized protein. (275 aa)
VDBG_06276Uncharacterized protein. (104 aa)
VDBG_06446AP-1 complex subunit mu-1-I; Belongs to the adaptor complexes medium subunit family. (434 aa)
VDBG_06683Synaptobrevin. (314 aa)
VDBG_06729ADP-ribosylation factor 1. (133 aa)
VDBG_06739ADP-ribosylation factor family protein. (261 aa)
VDBG_06744Vacuolar protein sorting-associated protein. (246 aa)
VDBG_06808Trafficking protein particle complex subunit 2. (163 aa)
VDBG_06890Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (179 aa)
VDBG_06899Predicted protein. (168 aa)
VDBG_06900Sphingolipid C9-methyltransferase. (736 aa)
VDBG_07147V-SNARE. (170 aa)
VDBG_07194Uncharacterized protein. (288 aa)
VDBG_07408Uncharacterized protein. (623 aa)
VDBG_06951Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (759 aa)
VDBG_07458Coatomer subunit alpha. (1052 aa)
VDBG_07483Conserved oligomeric Golgi complex subunit 5. (450 aa)
VDBG_07614Protein kinase domain-containing protein. (858 aa)
VDBG_07657Uncharacterized protein. (386 aa)
VDBG_07927Sec3-PIP2_bind domain-containing protein. (1424 aa)
VDBG_07960Stromal membrane-associated protein. (462 aa)
VDBG_08219Transport protein sec-13; Belongs to the WD repeat SEC13 family. (337 aa)
VDBG_08321Uncharacterized protein. (704 aa)
VDBG_08344GTP-binding protein ryh1. (194 aa)
VDBG_08355Uncharacterized protein. (52 aa)
VDBG_08501Transport protein SEC7. (1575 aa)
VDBG_08551VAC1 protein. (675 aa)
VDBG_08600Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (254 aa)
VDBG_08633Vacuolar protein sorting-associated protein; Belongs to the STXBP/unc-18/SEC1 family. (584 aa)
VDBG_08655Trafficking protein particle complex subunit 6A. (228 aa)
VDBG_08714Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (476 aa)
VDBG_08815Vesicular integral-membrane protein VIP36. (320 aa)
VDBG_08912Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1327 aa)
VDBG_08946Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (190 aa)
VDBG_09193Uncharacterized protein. (194 aa)
VDBG_09322Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (772 aa)
VDBG_09354AP-1 complex subunit gamma. (837 aa)
VDBG_09359Sec39 domain-containing protein. (901 aa)
VDBG_09368CASP. (732 aa)
VDBG_09684Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (690 aa)
VDBG_09723Predicted protein. (231 aa)
VDBG_09725Transport protein SEC24. (340 aa)
VDBG_09743VHS domain-containing protein. (106 aa)
VDBG_09758Vacuolar protein sorting-associated protein. (198 aa)
VDBG_09968Epsin-3. (499 aa)
VDBG_10196Vacuolar protein sorting-associated protein. (441 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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