27 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_07261	Uncharacterized protein. (183 aa)
	VDBG_06304	Mitochondrial inner membrane translocase subunit TIM44. (544 aa)
	VDBG_04752	Chaperone protein dnaJ 2. (307 aa)
	VDBG_04742	Uncharacterized protein. (538 aa)
	VDBG_03270	Uncharacterized protein. (123 aa)
	VDBG_00205	Psi1. (370 aa)
	VDBG_00917	Uncharacterized protein; Belongs to the GroES chaperonin family. (97 aa)
	VDBG_01352	U-box domain-containing protein. (224 aa)
	VDBG_00659	DnaJ domain-containing protein. (215 aa)
	VDBG_00556	Chaperone protein dnaJ. (337 aa)
	VDBG_06645	Chaperone protein dnaJ 2. (421 aa)
	VDBG_06762	Heat shock protein HSP98; Belongs to the ClpA/ClpB family. (921 aa)
	VDBG_06920	Uncharacterized protein. (741 aa)
	VDBG_08899	Hsp90 co-chaperone Cdc37. (426 aa)
	VDBG_07640	Glucose insensitive transcription protein. (319 aa)
	VDBG_08174	ARID domain-containing protein. (769 aa)
	VDBG_08176	Hsp90 co-chaperone AHA1. (325 aa)
	VDBG_01179	WD repeat-containing protein. (475 aa)
	VDBG_09687	DnaJ and TPR domain-containing protein. (510 aa)
	VDBG_09053	BAG domain-containing protein. (381 aa)
	VDBG_06121	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family. (261 aa)
	VDBG_05992	Zinc finger transcription factor ace1. (583 aa)
	VDBG_05412	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (247 aa)
	VDBG_05238	Wos2. (232 aa)
	VDBG_05034	DNL zinc finger domain-containing protein. (190 aa)
	VDBG_05016	DNAJ domain-containing protein. (270 aa)
	VDBG_04825	Heat shock protein. (744 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00205	VDBG_00556	C9S950	C9S6D6	Psi1.	Chaperone protein dnaJ.	0.498
VDBG_00205	VDBG_00917	C9S950	C9S7S3	Psi1.	Uncharacterized protein; Belongs to the GroES chaperonin family.	0.471
VDBG_00205	VDBG_01179	C9S950	C9S5K6	Psi1.	WD repeat-containing protein.	0.457
VDBG_00205	VDBG_04742	C9S950	C9SI60	Psi1.	Uncharacterized protein.	0.574
VDBG_00205	VDBG_04752	C9S950	C9SI70	Psi1.	Chaperone protein dnaJ 2.	0.937
VDBG_00205	VDBG_04825	C9S950	C9SIE3	Psi1.	Heat shock protein.	0.780
VDBG_00205	VDBG_05238	C9S950	C9SKB1	Psi1.	Wos2.	0.516
VDBG_00205	VDBG_05412	C9S950	C9SKT5	Psi1.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.585
VDBG_00205	VDBG_06645	C9S950	C9SP20	Psi1.	Chaperone protein dnaJ 2.	0.932
VDBG_00205	VDBG_06762	C9S950	C9SPD7	Psi1.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.873
VDBG_00205	VDBG_08174	C9S950	C9STE9	Psi1.	ARID domain-containing protein.	0.574
VDBG_00205	VDBG_08176	C9S950	C9STF1	Psi1.	Hsp90 co-chaperone AHA1.	0.574
VDBG_00556	VDBG_00205	C9S6D6	C9S950	Chaperone protein dnaJ.	Psi1.	0.498
VDBG_00556	VDBG_00917	C9S6D6	C9S7S3	Chaperone protein dnaJ.	Uncharacterized protein; Belongs to the GroES chaperonin family.	0.461
VDBG_00556	VDBG_04825	C9S6D6	C9SIE3	Chaperone protein dnaJ.	Heat shock protein.	0.486
VDBG_00556	VDBG_05412	C9S6D6	C9SKT5	Chaperone protein dnaJ.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.531
VDBG_00556	VDBG_06762	C9S6D6	C9SPD7	Chaperone protein dnaJ.	Heat shock protein HSP98; Belongs to the ClpA/ClpB family.	0.486
VDBG_00556	VDBG_09687	C9S6D6	C9SXR2	Chaperone protein dnaJ.	DnaJ and TPR domain-containing protein.	0.915
VDBG_00659	VDBG_00917	C9S6R0	C9S7S3	DnaJ domain-containing protein.	Uncharacterized protein; Belongs to the GroES chaperonin family.	0.453
VDBG_00659	VDBG_04825	C9S6R0	C9SIE3	DnaJ domain-containing protein.	Heat shock protein.	0.551