(14 nodes) Adenine nucleotide transport network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_05380	Peroxisomal membrane protein PMP47A; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)
	VDBG_05593	ADP,ATP carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (310 aa)
	VDBG_05717	ATP-binding cassette sub-family D member 1. (625 aa)
	VDBG_06626	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
	VDBG_07041	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family. (330 aa)
	VDBG_06961	Peroxisomal adenine nucleotide transporter 1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (342 aa)
	VDBG_08046	Vacuolar protein-sorting-associated protein. (161 aa)
	VDBG_08608	Zn(2)-C6 fungal-type domain-containing protein. (342 aa)
	VDBG_00559	Vacuolar-sorting protein snf7. (223 aa)
	VDBG_00895	Mitochondrial carrier protein LEU5; Belongs to the mitochondrial carrier (TC 2.A.29) family. (360 aa)
	VDBG_01737	Acetyl-coenzyme A transporter 1. (400 aa)
	VDBG_03294	Fungal_trans domain-containing protein. (538 aa)
	VDBG_04008	Calcium-binding mitochondrial carrier SAL1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (537 aa)
	VDBG_03839	Peroxisomal long-chain fatty acid import protein. (845 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00559	VDBG_06626	C9S6D9	C9SP01	Vacuolar-sorting protein snf7.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.967
VDBG_00559	VDBG_08046	C9S6D9	C9ST21	Vacuolar-sorting protein snf7.	Vacuolar protein-sorting-associated protein.	0.943
VDBG_03839	VDBG_05380	C9SHD6	C9SKQ3	Peroxisomal long-chain fatty acid import protein.	Peroxisomal membrane protein PMP47A; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.692
VDBG_03839	VDBG_05717	C9SHD6	C9SLP0	Peroxisomal long-chain fatty acid import protein.	ATP-binding cassette sub-family D member 1.	0.956
VDBG_05380	VDBG_03839	C9SKQ3	C9SHD6	Peroxisomal membrane protein PMP47A; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal long-chain fatty acid import protein.	0.692
VDBG_05380	VDBG_05717	C9SKQ3	C9SLP0	Peroxisomal membrane protein PMP47A; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATP-binding cassette sub-family D member 1.	0.670
VDBG_05717	VDBG_03839	C9SLP0	C9SHD6	ATP-binding cassette sub-family D member 1.	Peroxisomal long-chain fatty acid import protein.	0.956
VDBG_05717	VDBG_05380	C9SLP0	C9SKQ3	ATP-binding cassette sub-family D member 1.	Peroxisomal membrane protein PMP47A; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.670
VDBG_05717	VDBG_06961	C9SLP0	C9SR49	ATP-binding cassette sub-family D member 1.	Peroxisomal adenine nucleotide transporter 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.425
VDBG_06626	VDBG_00559	C9SP01	C9S6D9	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Vacuolar-sorting protein snf7.	0.967
VDBG_06626	VDBG_08046	C9SP01	C9ST21	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Vacuolar protein-sorting-associated protein.	0.999
VDBG_06961	VDBG_05717	C9SR49	C9SLP0	Peroxisomal adenine nucleotide transporter 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATP-binding cassette sub-family D member 1.	0.425
VDBG_08046	VDBG_00559	C9ST21	C9S6D9	Vacuolar protein-sorting-associated protein.	Vacuolar-sorting protein snf7.	0.943
VDBG_08046	VDBG_06626	C9ST21	C9SP01	Vacuolar protein-sorting-associated protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.999