STRINGSTRING
VDBG_04404 VDBG_04404 VDBG_00301 VDBG_00301 MDM10 MDM10 VDBG_01266 VDBG_01266 VDBG_00605 VDBG_00605 VDBG_00623 VDBG_00623 VDBG_01278 VDBG_01278 VDBG_00664 VDBG_00664 VDBG_00685 VDBG_00685 VDBG_00757 VDBG_00757 VDBG_01345 VDBG_01345 VDBG_00841 VDBG_00841 VDBG_00910 VDBG_00910 VDBG_00977 VDBG_00977 VDBG_00114 VDBG_00114 VDBG_00146 VDBG_00146 VDBG_00186 VDBG_00186 VDBG_00187 VDBG_00187 VDBG_02133 VDBG_02133 VDBG_02389 VDBG_02389 VDBG_01481 VDBG_01481 VDBG_01566 VDBG_01566 VDBG_01572 VDBG_01572 VDBG_01579 VDBG_01579 VDBG_01911 VDBG_01911 VDBG_01938 VDBG_01938 VDBG_01978 VDBG_01978 VDBG_02040 VDBG_02040 VDBG_03050 VDBG_03050 VDBG_03392 VDBG_03392 VDBG_02653 VDBG_02653 VDBG_02654 VDBG_02654 VDBG_02754 VDBG_02754 VDBG_03881 VDBG_03881 VDBG_03895 VDBG_03895 VDBG_04007 VDBG_04007 VDBG_04056 VDBG_04056 VDBG_03430 VDBG_03430 VDBG_03567 VDBG_03567 VDBG_03617 VDBG_03617 VDBG_03678 VDBG_03678 VDBG_03768 VDBG_03768 VDBG_03806 VDBG_03806 VDBG_04694 VDBG_04694 VDBG_04728 VDBG_04728 VDBG_04733 VDBG_04733 VDBG_04836 VDBG_04836 VDBG_04900 VDBG_04900 VDBG_04341 VDBG_04341 VDBG_04380 VDBG_04380 VDBG_04405 VDBG_04405 VDBG_04432 VDBG_04432 VDBG_04441 VDBG_04441 VDBG_05758 VDBG_05758 VDBG_05773 VDBG_05773 VDBG_05358 VDBG_05358 VDBG_05556 VDBG_05556 VDBG_05573 VDBG_05573 VDBG_05701 VDBG_05701 VDBG_05841 VDBG_05841 VDBG_05844 VDBG_05844 VDBG_05979 VDBG_05979 VDBG_05995 VDBG_05995 VDBG_05999 VDBG_05999 VDBG_06051 VDBG_06051 VDBG_06275 VDBG_06275 VDBG_06276 VDBG_06276 VDBG_06348 VDBG_06348 VDBG_06784 VDBG_06784 VDBG_06811 VDBG_06811 VDBG_07205 VDBG_07205 VDBG_06951 VDBG_06951 VDBG_06972 VDBG_06972 VDBG_06975 VDBG_06975 VDBG_07432 VDBG_07432 VDBG_07433 VDBG_07433 VDBG_07544 VDBG_07544 VDBG_07657 VDBG_07657 VDBG_07829 VDBG_07829 VDBG_07927 VDBG_07927 VDBG_08194 VDBG_08194 VDBG_08205 VDBG_08205 VDBG_08206 VDBG_08206 VDBG_08304 VDBG_08304 VDBG_08343 VDBG_08343 VDBG_08551 VDBG_08551 VDBG_08714 VDBG_08714 VDBG_08717 VDBG_08717 TIF6 TIF6 VDBG_08759 VDBG_08759 VDBG_08951 VDBG_08951 VDBG_09342 VDBG_09342 VDBG_09352 VDBG_09352 VDBG_09368 VDBG_09368 VDBG_09384 VDBG_09384 VDBG_09385 VDBG_09385 VDBG_09473 VDBG_09473 VDBG_09677 VDBG_09677 VDBG_09813 VDBG_09813 VDBG_09918 VDBG_09918 VDBG_09919 VDBG_09919 VDBG_10196 VDBG_10196
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_04404Acyl-CoA desaturase. (184 aa)
VDBG_00301Uncharacterized protein. (603 aa)
MDM10Mitochondrial distribution and morphology protein 10; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis and may function in phospholipid exchange. MDM10 is involved in the late assembly steps of the general translocase of the mitochondrial outer membrane (TOM complex). Functions in the TOM40-specific route of the assembly of outer membrane beta-barrel proteins, including the association of TOM40 with the recepto [...] (468 aa)
VDBG_01266SUN domain-containing protein. (771 aa)
VDBG_00605Prohibitin. (276 aa)
VDBG_00623MSP domain-containing protein. (259 aa)
VDBG_01278Mixed-linked glucanase. (921 aa)
VDBG_00664SSOI. (332 aa)
VDBG_00685Alpha-centractin; Belongs to the actin family. (340 aa)
VDBG_00757Spindle pole body component. (839 aa)
VDBG_01345HTH APSES-type domain-containing protein. (418 aa)
VDBG_00841Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (1059 aa)
VDBG_00910Dynein heavy chain. (3880 aa)
VDBG_00977GTPase-activating protein ZNF289. (482 aa)
VDBG_00114Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1654 aa)
VDBG_00146Sec8 exocyst complex component specific domain-containing protein. (1104 aa)
VDBG_00186Nucleolar GTP-binding protein. (643 aa)
VDBG_00187LTV1. (330 aa)
VDBG_02133Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (389 aa)
VDBG_02389Bud site selection protein. (264 aa)
VDBG_01481Intracellular protein transport protein USO1. (1011 aa)
VDBG_01566Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (130 aa)
VDBG_01572Uncharacterized protein. (409 aa)
VDBG_01579Uncharacterized protein. (1145 aa)
VDBG_01911Zuotin. (444 aa)
VDBG_01938Syntaxin-5. (312 aa)
VDBG_01978Anucleate primary sterigmata protein A. (1586 aa)
VDBG_02040Uncharacterized protein. (280 aa)
VDBG_03050AvaB protein. (1003 aa)
VDBG_03392Exportin-1. (1009 aa)
VDBG_02653Microtubule-associated protein RP/EB family member 1. (244 aa)
VDBG_02654V-SNARE. (284 aa)
VDBG_02754Nuclear distribution protein nudE. (601 aa)
VDBG_03881Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (523 aa)
VDBG_03895Methyltranfer_dom domain-containing protein. (210 aa)
VDBG_04007V-SNARE. (284 aa)
VDBG_04056L-amino acid oxidase. (597 aa)
VDBG_03430Vacuolar protein sorting 41. (1319 aa)
VDBG_03567SNI2. (784 aa)
VDBG_03617L-amino acid oxidase. (614 aa)
VDBG_03678Ribosome biogenesis ATPase RIX7; Belongs to the AAA ATPase family. (507 aa)
VDBG_03768Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (91 aa)
VDBG_03806Spc7 domain-containing protein. (1460 aa)
VDBG_04694Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (198 aa)
VDBG_04728Uncharacterized protein. (550 aa)
VDBG_04733Predicted protein. (278 aa)
VDBG_04836Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (915 aa)
VDBG_04900Tricalbin-2. (1397 aa)
VDBG_04341Csm1 domain-containing protein. (425 aa)
VDBG_04380Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (658 aa)
VDBG_04405Acyl-CoA desaturase; Belongs to the cytochrome b5 family. (274 aa)
VDBG_04432Nuclear GTP-binding protein NUG1. (497 aa)
VDBG_04441ATP-binding cassette sub-family E member 1. (335 aa)
VDBG_05758Vacuolar membrane protein. (802 aa)
VDBG_05773Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (686 aa)
VDBG_05358Dynactin. (992 aa)
VDBG_05556SNARE domain-containing protein; Belongs to the syntaxin family. (264 aa)
VDBG_05573Cupin domain-containing protein. (653 aa)
VDBG_05701Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (193 aa)
VDBG_05841Dynamin-A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (804 aa)
VDBG_05844GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (218 aa)
VDBG_05979Serine/threonine-protein kinase plo1. (1002 aa)
VDBG_05995mRNA export factor mex67. (664 aa)
VDBG_05999Tyrosine-protein phosphatase CDC14. (642 aa)
VDBG_06051Mitochondrial distribution and morphology protein. (701 aa)
VDBG_06275Uncharacterized protein. (275 aa)
VDBG_06276Uncharacterized protein. (104 aa)
VDBG_06348Kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (818 aa)
VDBG_06784Vacuolar membrane protein pep3. (957 aa)
VDBG_06811Uncharacterized protein. (848 aa)
VDBG_07205Nuclear movement protein nudC. (191 aa)
VDBG_06951Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (759 aa)
VDBG_06972Uncharacterized protein. (1208 aa)
VDBG_06975DML1. (517 aa)
VDBG_07432Uncharacterized protein. (220 aa)
VDBG_07433Uncharacterized protein. (66 aa)
VDBG_07544Armadillo/beta-catenin-like repeat-containing protein. (502 aa)
VDBG_07657Uncharacterized protein. (386 aa)
VDBG_07829Protein phosphatase 1A. (517 aa)
VDBG_07927Sec3-PIP2_bind domain-containing protein. (1424 aa)
VDBG_08194HEC/Ndc80p family protein. (731 aa)
VDBG_08205Intermediate filament protein. (508 aa)
VDBG_08206Intermediate filament protein. (491 aa)
VDBG_08304Transport Sec1b; Belongs to the STXBP/unc-18/SEC1 family. (538 aa)
VDBG_08343Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (448 aa)
VDBG_08551VAC1 protein. (675 aa)
VDBG_08714Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (476 aa)
VDBG_0871740S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
VDBG_08759Serine/threonine-protein phosphatase PP1. (180 aa)
VDBG_08951Nuclear distribution protein nudF. (391 aa)
VDBG_09342N-acetyltransferase. (190 aa)
VDBG_09352SNARE domain-containing protein; Belongs to the syntaxin family. (360 aa)
VDBG_09368CASP. (732 aa)
VDBG_09384Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (536 aa)
VDBG_09385Uncharacterized protein. (329 aa)
VDBG_09473ATP-binding cassette sub-family F member 2. (632 aa)
VDBG_09677DnaJ domain-containing protein. (506 aa)
VDBG_09813Cell division control protein. (473 aa)
VDBG_09918Kinesin. (136 aa)
VDBG_09919Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (843 aa)
VDBG_10196Vacuolar protein sorting-associated protein. (441 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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