STRINGSTRING
VDBG_08152 VDBG_08152 VDBG_00232 VDBG_00232 VDBG_02203 VDBG_02203 VDBG_04144 VDBG_04144 VDBG_04443 VDBG_04443 VDBG_06299 VDBG_06299 VDBG_06623 VDBG_06623 VDBG_06748 VDBG_06748 VDBG_08142 VDBG_08142 VDBG_08584 VDBG_08584
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_08152NAD-dependent deacetylase sirtuin-5. (287 aa)
VDBG_002323-hydroxybutyryl-CoA dehydrogenase. (320 aa)
VDBG_02203NAD-dependent deacetylase sirtuin-2. (270 aa)
VDBG_04144Nitrogen metabolic regulation protein. (406 aa)
VDBG_04443Uncharacterized protein. (165 aa)
VDBG_06299NAD-dependent deacetylase sirtuin-7. (341 aa)
VDBG_06623Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. (446 aa)
VDBG_06748Silencing information regulator. (155 aa)
VDBG_08142NAD-dependent histone deacetylase SIR2. (534 aa)
VDBG_08584Hst3 protein. (1126 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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