STRINGSTRING
VDBG_04775 VDBG_04775 VDBG_05449 VDBG_05449 VDBG_08189 VDBG_08189 VDBG_01677 VDBG_01677 VDBG_08190 VDBG_08190 VDBG_04776 VDBG_04776
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_04775Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (239 aa)
VDBG_05449DNA repair protein rad14. (331 aa)
VDBG_08189Uncharacterized protein. (317 aa)
VDBG_01677Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
VDBG_08190Mating-type switching protein swi10. (414 aa)
VDBG_04776Vezatin domain-containing protein. (505 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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