16 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00464	E3 ubiquitin-protein ligase. (791 aa)
	VDBG_00524	Guanine nucleotide-binding protein alpha-2 subunit. (354 aa)
	VDBG_00614	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (127 aa)
	VDBG_00674	WD repeat-containing protein pop3. (318 aa)
	VDBG_01062	Predicted protein. (111 aa)
	VDBG_00104	Mannosyl-oligosaccharide glucosidase. (487 aa)
	VDBG_01636	Signal peptide peptidase family protein. (580 aa)
	VDBG_03012	Chitin synthase export chaperone. (296 aa)
	VDBG_04316	Uncharacterized protein. (107 aa)
	VDBG_04398	Guanine nucleotide-binding protein alpha-3 subunit. (355 aa)
	VDBG_06414	Long-chain fatty acid transport protein. (370 aa)
	VDBG_07113	Fatty acid transporter protein. (618 aa)
	VDBG_07823	Guanine nucleotide-binding protein subunit beta. (324 aa)
	VDBG_08551	VAC1 protein. (675 aa)
	VDBG_08761	Guanine nucleotide-binding protein subunit gamma. (93 aa)
	VDBG_09318	Septation protein imp2. (562 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00524	VDBG_07823	C9S6A4	C9SSE8	Guanine nucleotide-binding protein alpha-2 subunit.	Guanine nucleotide-binding protein subunit beta.	0.974
VDBG_00524	VDBG_08761	C9S6A4	C9SV36	Guanine nucleotide-binding protein alpha-2 subunit.	Guanine nucleotide-binding protein subunit gamma.	0.515
VDBG_03012	VDBG_07823	C9SCT8	C9SSE8	Chitin synthase export chaperone.	Guanine nucleotide-binding protein subunit beta.	0.918
VDBG_03012	VDBG_08761	C9SCT8	C9SV36	Chitin synthase export chaperone.	Guanine nucleotide-binding protein subunit gamma.	0.447
VDBG_04398	VDBG_07823	C9SJC7	C9SSE8	Guanine nucleotide-binding protein alpha-3 subunit.	Guanine nucleotide-binding protein subunit beta.	0.974
VDBG_04398	VDBG_08761	C9SJC7	C9SV36	Guanine nucleotide-binding protein alpha-3 subunit.	Guanine nucleotide-binding protein subunit gamma.	0.515
VDBG_07823	VDBG_00524	C9SSE8	C9S6A4	Guanine nucleotide-binding protein subunit beta.	Guanine nucleotide-binding protein alpha-2 subunit.	0.974
VDBG_07823	VDBG_03012	C9SSE8	C9SCT8	Guanine nucleotide-binding protein subunit beta.	Chitin synthase export chaperone.	0.918
VDBG_07823	VDBG_04398	C9SSE8	C9SJC7	Guanine nucleotide-binding protein subunit beta.	Guanine nucleotide-binding protein alpha-3 subunit.	0.974
VDBG_07823	VDBG_08761	C9SSE8	C9SV36	Guanine nucleotide-binding protein subunit beta.	Guanine nucleotide-binding protein subunit gamma.	0.994
VDBG_08761	VDBG_00524	C9SV36	C9S6A4	Guanine nucleotide-binding protein subunit gamma.	Guanine nucleotide-binding protein alpha-2 subunit.	0.515
VDBG_08761	VDBG_03012	C9SV36	C9SCT8	Guanine nucleotide-binding protein subunit gamma.	Chitin synthase export chaperone.	0.447
VDBG_08761	VDBG_04398	C9SV36	C9SJC7	Guanine nucleotide-binding protein subunit gamma.	Guanine nucleotide-binding protein alpha-3 subunit.	0.515
VDBG_08761	VDBG_07823	C9SV36	C9SSE8	Guanine nucleotide-binding protein subunit gamma.	Guanine nucleotide-binding protein subunit beta.	0.994