45 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_08412	A_deaminase domain-containing protein. (559 aa)
	VDBG_10130	Uncharacterized protein. (337 aa)
	VDBG_10034	Uncharacterized protein. (417 aa)
	VDBG_09983	Beta-glucosidase. (682 aa)
	VDBG_09943	Predicted protein. (219 aa)
	VDBG_09499	Beta-galactosidase. (765 aa)
	VDBG_09581	Fungal specific transcription factor domain-containing protein. (984 aa)
	VDBG_09021	Uncharacterized protein. (395 aa)
	VDBG_04416	Uncharacterized protein. (351 aa)
	VDBG_05167	C6 transcription factor domain-containing protein. (616 aa)
	VDBG_05559	Gamma-glutamyltranspeptidase. (574 aa)
	VDBG_05647	Beta-glucosidase. (792 aa)
	VDBG_05724	Beta-galactosidase. (918 aa)
	VDBG_06541	C6 zinc finger domain-containing protein. (774 aa)
	VDBG_06556	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	VDBG_07889	Gamma-glutamyltranspeptidase. (561 aa)
	VDBG_07914	A_deaminase domain-containing protein. (599 aa)
	VDBG_07968	Alanine aminotransferase. (399 aa)
	VDBG_07969	Predicted protein. (1058 aa)
	VDBG_08193	NAPE-hydrolyzing phospholipase D. (422 aa)
	VDBG_08421	Oligopeptide transporter. (744 aa)
	VDBG_08474	Beta-glucosidase. (816 aa)
	VDBG_08593	Beta-glucosidase. (706 aa)
	VDBG_08603	Endo-1,4-beta-xylanase C. (293 aa)
	VDBG_08725	Tripeptidyl-peptidase. (594 aa)
	VDBG_08726	Metal resistance protein YCF1. (1583 aa)
	VDBG_01123	Dimethylaniline monooxygenase. (468 aa)
	VDBG_00526	Beta-glucosidase. (794 aa)
	VDBG_00567	5-oxoprolinase. (1378 aa)
	VDBG_00568	Adenosine deaminase family protein. (457 aa)
	VDBG_00719	5-oxoprolinase. (1241 aa)
	VDBG_00723	Uncharacterized protein. (1481 aa)
	VDBG_00800	Fungal specific transcription factor domain-containing protein. (735 aa)
	VDBG_01107	Beta-galactosidase. (1017 aa)
	VDBG_02246	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (902 aa)
	VDBG_02253	Uncharacterized protein. (396 aa)
	VDBG_01699	Homoserine kinase. (364 aa)
	VDBG_03067	Beta-glucosidase. (804 aa)
	VDBG_03264	Suaprga1. (307 aa)
	VDBG_02556	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (920 aa)
	VDBG_02719	Uncharacterized protein. (415 aa)
	VDBG_04030	Beta-glucosidase. (551 aa)
	VDBG_03573	Uncharacterized protein. (261 aa)
	VDBG_04272	Predicted protein. (116 aa)
	VDBG_05007	Zn(2)-C6 fungal-type domain-containing protein. (651 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00526	VDBG_02246	C9S6A6	C9S9S4	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.681
VDBG_00526	VDBG_02556	C9S6A6	C9SDW1	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.699
VDBG_00526	VDBG_03067	C9S6A6	C9SCZ3	Beta-glucosidase.	Beta-glucosidase.	0.676
VDBG_00526	VDBG_05647	C9S6A6	C9SLH0	Beta-glucosidase.	Beta-glucosidase.	0.680
VDBG_00526	VDBG_08474	C9S6A6	C9SU53	Beta-glucosidase.	Beta-glucosidase.	0.678
VDBG_00526	VDBG_08593	C9S6A6	C9SUH2	Beta-glucosidase.	Beta-glucosidase.	0.681
VDBG_00526	VDBG_09983	C9S6A6	C9SYK8	Beta-glucosidase.	Beta-glucosidase.	0.667
VDBG_00567	VDBG_00719	C9S6E7	C9S700	5-oxoprolinase.	5-oxoprolinase.	0.902
VDBG_00567	VDBG_05559	C9S6E7	C9SL82	5-oxoprolinase.	Gamma-glutamyltranspeptidase.	0.910
VDBG_00567	VDBG_07889	C9S6E7	C9SSL4	5-oxoprolinase.	Gamma-glutamyltranspeptidase.	0.910
VDBG_00568	VDBG_07914	C9S6E8	C9SSN9	Adenosine deaminase family protein.	A_deaminase domain-containing protein.	0.912
VDBG_00568	VDBG_08412	C9S6E8	C9STZ1	Adenosine deaminase family protein.	A_deaminase domain-containing protein.	0.908
VDBG_00719	VDBG_00567	C9S700	C9S6E7	5-oxoprolinase.	5-oxoprolinase.	0.902
VDBG_00719	VDBG_05559	C9S700	C9SL82	5-oxoprolinase.	Gamma-glutamyltranspeptidase.	0.910
VDBG_00719	VDBG_07889	C9S700	C9SSL4	5-oxoprolinase.	Gamma-glutamyltranspeptidase.	0.910
VDBG_02246	VDBG_00526	C9S9S4	C9S6A6	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.681
VDBG_02246	VDBG_02556	C9S9S4	C9SDW1	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.683
VDBG_02246	VDBG_03067	C9S9S4	C9SCZ3	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.679
VDBG_02246	VDBG_05647	C9S9S4	C9SLH0	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.684
VDBG_02246	VDBG_08474	C9S9S4	C9SU53	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.681