STRINGSTRING
VDBG_00148 VDBG_00148 VDBG_10197 VDBG_10197 VDBG_07157 VDBG_07157 VDBG_06011 VDBG_06011 VDBG_05751 VDBG_05751 VDBG_05750 VDBG_05750 VDBG_03820 VDBG_03820 VDBG_03547 VDBG_03547 VDBG_01723 VDBG_01723 VDBG_02403 VDBG_02403 VDBG_00149 VDBG_00149 VDBG_01034 VDBG_01034 VDBG_00630 VDBG_00630 VDBG_00301 VDBG_00301 VDBG_00282 VDBG_00282
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00148Serine/threonine-protein kinase. (68 aa)
VDBG_10197RING finger protein. (427 aa)
VDBG_07157Maintenance of ploidy protein mob1. (191 aa)
VDBG_06011Cell division control protein. (485 aa)
VDBG_05751Conserved leucine-rich repeat protein. (452 aa)
VDBG_05750Conserved leucine-rich repeat protein. (1138 aa)
VDBG_03820Uncharacterized protein. (1007 aa)
VDBG_03547Anucleate primary sterigmata protein B. (295 aa)
VDBG_01723Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (461 aa)
VDBG_02403Serine/threonine-protein kinase. (256 aa)
VDBG_00149Serine/threonine-protein kinase. (425 aa)
VDBG_01034J domain-containing protein. (814 aa)
VDBG_00630Cell division control protein. (1426 aa)
VDBG_00301Uncharacterized protein. (603 aa)
VDBG_00282NIMA interactive protein. (660 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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