STRINGSTRING
VDBG_01925 VDBG_01925 VDBG_03989 VDBG_03989 VDBG_03561 VDBG_03561 VDBG_04748 VDBG_04748 VDBG_07566 VDBG_07566 VDBG_08035 VDBG_08035 VDBG_09245 VDBG_09245
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01925CMP/dCMP-type deaminase domain-containing protein. (405 aa)
VDBG_03989CMP/dCMP-type deaminase domain-containing protein. (429 aa)
VDBG_03561CMP/dCMP deaminase. (222 aa)
VDBG_04748Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (163 aa)
VDBG_07566FCY1p. (239 aa)
VDBG_08035Diaminohydroxyphosphoribosylamino-pyrimidine deaminase. (177 aa)
VDBG_09245Deoxycytidylate deaminase. (147 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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