STRINGSTRING
VDBG_05807 VDBG_05807 VDBG_05596 VDBG_05596 VDBG_06301 VDBG_06301 VDBG_09077 VDBG_09077 VDBG_06406 VDBG_06406 VDBG_17011 VDBG_17011 VDBG_05733 VDBG_05733 VDBG_03467 VDBG_03467 VDBG_01311 VDBG_01311 VDBG_00579 VDBG_00579 VDBG_00424 VDBG_00424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_05807Bilirubin oxidase. (602 aa)
VDBG_05596Uncharacterized protein. (284 aa)
VDBG_06301Uncharacterized protein. (214 aa)
VDBG_09077Iron transport multicopper oxidase FET3; Belongs to the multicopper oxidase family. (531 aa)
VDBG_06406Laccase-1. (568 aa)
VDBG_17011Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. (248 aa)
VDBG_05733Uncharacterized protein. (189 aa)
VDBG_03467Iron transport multicopper oxidase FET3; Belongs to the multicopper oxidase family. (563 aa)
VDBG_01311Uncharacterized protein. (409 aa)
VDBG_00579Iron transport multicopper oxidase FET3; Belongs to the multicopper oxidase family. (570 aa)
VDBG_00424Laccase-2; Belongs to the multicopper oxidase family. (552 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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