STRINGSTRING
VDBG_09212 VDBG_09212 VDBG_00387 VDBG_00387 VDBG_00526 VDBG_00526 VDBG_00623 VDBG_00623 VDBG_00669 VDBG_00669 VDBG_00799 VDBG_00799 VDBG_01380 VDBG_01380 VDBG_00059 VDBG_00059 VDBG_02084 VDBG_02084 VDBG_02246 VDBG_02246 VDBG_02272 VDBG_02272 VDBG_01600 VDBG_01600 VDBG_02505 VDBG_02505 VDBG_01760 VDBG_01760 VDBG_01872 VDBG_01872 VDBG_01947 VDBG_01947 VDBG_02848 VDBG_02848 VDBG_02984 VDBG_02984 VDBG_03067 VDBG_03067 VDBG_03273 VDBG_03273 VDBG_03292 VDBG_03292 VDBG_02556 VDBG_02556 VDBG_03377 VDBG_03377 VDBG_03406 VDBG_03406 VDBG_04030 VDBG_04030 VDBG_03554 VDBG_03554 VDBG_03835 VDBG_03835 VDBG_04514 VDBG_04514 VDBG_04801 VDBG_04801 VDBG_05484 VDBG_05484 VDBG_05647 VDBG_05647 VDBG_06382 VDBG_06382 VDBG_06466 VDBG_06466 VDBG_06478 VDBG_06478 VDBG_06578 VDBG_06578 VDBG_07117 VDBG_07117 VDBG_07362 VDBG_07362 VDBG_07559 VDBG_07559 VDBG_07714 VDBG_07714 VDBG_07757 VDBG_07757 VDBG_07992 VDBG_07992 VDBG_08009 VDBG_08009 VDBG_08474 VDBG_08474 VDBG_08570 VDBG_08570 VDBG_08593 VDBG_08593 VDBG_08893 VDBG_08893 VDBG_09046 VDBG_09046 VDBG_09605 VDBG_09605 VDBG_09511 VDBG_09511 VDBG_09894 VDBG_09894 VDBG_09983 VDBG_09983 VDBG_10044 VDBG_10044 VDBG_10160 VDBG_10160
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_09212Serin endopeptidase; Belongs to the peptidase S8 family. (853 aa)
VDBG_00387GTP-binding protein EsdC. (238 aa)
VDBG_00526Beta-glucosidase. (794 aa)
VDBG_00623MSP domain-containing protein. (259 aa)
VDBG_00669ZZ type zinc finger domain-containing protein. (849 aa)
VDBG_00799Glucoamylase. (622 aa)
VDBG_01380Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (1226 aa)
VDBG_00059AMPKBI domain-containing protein. (414 aa)
VDBG_02084Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (832 aa)
VDBG_02246Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (902 aa)
VDBG_02272Beta-galactosidase. (383 aa)
VDBG_01600Glucoamylase. (632 aa)
VDBG_02505Fibronectin type III domain-containing protein. (764 aa)
VDBG_01760Chitin biosynthesis protein CHS5. (166 aa)
VDBG_01872Cellulose-binding protein. (548 aa)
VDBG_01947Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (835 aa)
VDBG_02848PKD domain-containing protein. (435 aa)
VDBG_02984Uncharacterized protein. (1528 aa)
VDBG_03067Beta-glucosidase. (804 aa)
VDBG_03273Periplasmic beta-glucosidase. (781 aa)
VDBG_03292Thermostable beta-glucosidase B. (516 aa)
VDBG_02556Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (920 aa)
VDBG_03377Alfa-L-rhamnosidase. (1001 aa)
VDBG_034061,4-alpha-glucan-branching enzyme. (689 aa)
VDBG_04030Beta-glucosidase. (551 aa)
VDBG_03554Endoglucanase B; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (518 aa)
VDBG_03835Thermostable beta-glucosidase B. (868 aa)
VDBG_04514WSC domain-containing protein. (1085 aa)
VDBG_04801Bacterial alpha-L-rhamnosidase domain-containing protein. (899 aa)
VDBG_05484Starch binding domain-containing protein. (400 aa)
VDBG_05647Beta-glucosidase. (792 aa)
VDBG_06382Glucoamylase. (583 aa)
VDBG_06466Endonuclease/exonuclease/phosphatase family. (509 aa)
VDBG_06478Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (1020 aa)
VDBG_06578Uncharacterized protein. (1525 aa)
VDBG_07117SPT23. (1402 aa)
VDBG_07362Fibronectin type-III domain-containing protein. (1159 aa)
VDBG_07559Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (818 aa)
VDBG_07714Cellulose-binding protein. (454 aa)
VDBG_07757Alkaline elastase YaB; Belongs to the peptidase S8 family. (1247 aa)
VDBG_07992Beta-mannosidase. (861 aa)
VDBG_08009Periplasmic beta-glucosidase. (774 aa)
VDBG_08474Beta-glucosidase. (816 aa)
VDBG_08570Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (584 aa)
VDBG_08593Beta-glucosidase. (706 aa)
VDBG_08893Alfa-L-rhamnosidase. (812 aa)
VDBG_09046Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (852 aa)
VDBG_09605Galactose oxidase. (734 aa)
VDBG_09511Type II inositol-1,4,5-trisphosphate 5-phosphatase. (1035 aa)
VDBG_09894Beta-mannosidase. (836 aa)
VDBG_09983Beta-glucosidase. (682 aa)
VDBG_10044Beta-galactosidase. (1131 aa)
VDBG_10160FG-GAP repeat family protein. (525 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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