STRINGSTRING
VDBG_03904 VDBG_03904 VDBG_03797 VDBG_03797 VDBG_07382 VDBG_07382 VDBG_04294 VDBG_04294 VDBG_09345 VDBG_09345 VDBG_08709 VDBG_08709
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_03904Pre-mRNA-processing factor 17. (514 aa)
VDBG_03797Chromatin assembly factor 1 subunit B. (693 aa)
VDBG_07382WD repeat-containing protein slp1. (600 aa)
VDBG_04294WD repeat-containing protein. (610 aa)
VDBG_09345WD repeat-containing protein srw1. (587 aa)
VDBG_08709Uncharacterized protein. (721 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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