STRINGSTRING
VDBG_07723 VDBG_07723 VDBG_01542 VDBG_01542 VDBG_03062 VDBG_03062 VDBG_03953 VDBG_03953 VDBG_04258 VDBG_04258 VDBG_05141 VDBG_05141 VDBG_06058 VDBG_06058 VDBG_06191 VDBG_06191 VDBG_06420 VDBG_06420 VDBG_07225 VDBG_07225 VDBG_07249 VDBG_07249 VDBG_08392 VDBG_08392 VDBG_08436 VDBG_08436 VDBG_08711 VDBG_08711 VDBG_09176 VDBG_09176 VDBG_09334 VDBG_09334 VDBG_09437 VDBG_09437
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_07723Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
VDBG_01542Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (496 aa)
VDBG_03062Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (330 aa)
VDBG_03953Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)
VDBG_04258Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (521 aa)
VDBG_05141Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (495 aa)
VDBG_06058Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (428 aa)
VDBG_06191Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (498 aa)
VDBG_06420Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
VDBG_07225Succinate-semialdehyde dehydrogenase. (585 aa)
VDBG_07249Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)
VDBG_08392Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (467 aa)
VDBG_08436Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
VDBG_08711Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
VDBG_09176Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (498 aa)
VDBG_09334Succinate-semialdehyde dehydrogenase. (494 aa)
VDBG_09437Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (295 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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