STRINGSTRING
VDBG_06099 VDBG_06099 VDBG_07829 VDBG_07829 VDBG_00405 VDBG_00405 VDBG_04896 VDBG_04896 VDBG_05225 VDBG_05225 VDBG_05367 VDBG_05367
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_06099Protein phosphatase; Belongs to the PP2C family. (671 aa)
VDBG_07829Protein phosphatase 1A. (517 aa)
VDBG_00405Protein phosphatase 1G. (455 aa)
VDBG_04896Protein phosphatase; Belongs to the PP2C family. (344 aa)
VDBG_05225Phosphatase. (607 aa)
VDBG_05367Protein phosphatase 1K. (116 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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