49 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_09018	Anhydro-N-acetylmuramic acid kinase. (456 aa)
	VDBG_09001	Hemolysin-III family protein. (165 aa)
	VDBG_08818	Phosphoinositide phospholipase C. (576 aa)
	VDBG_08817	cAMP-dependent protein kinase; Belongs to the protein kinase superfamily. (442 aa)
	VDBG_07953	Long-chain-fatty-acid-CoA ligase. (692 aa)
	VDBG_07331	Uncharacterized protein. (580 aa)
	VDBG_07252	SpvB domain-containing protein. (1579 aa)
	VDBG_07154	Aimless RasGEF. (945 aa)
	VDBG_06312	Mycocerosic acid synthase. (1755 aa)
	VDBG_06292	Adiponectin receptor protein. (321 aa)
	VDBG_06069	C3H1-type domain-containing protein. (343 aa)
	VDBG_05722	Uncharacterized protein. (318 aa)
	VDBG_05684	Uncharacterized protein. (500 aa)
	VDBG_04998	Lovastatin nonaketide synthase. (3998 aa)
	VDBG_09122	Lovastatin nonaketide synthase. (2206 aa)
	VDBG_09307	ApbA domain-containing protein. (117 aa)
	VDBG_09388	Amt4. (286 aa)
	VDBG_09680	Predicted protein. (202 aa)
	VDBG_09770	Phosphoinositide phospholipase C. (546 aa)
	VDBG_09801	Phenolpthiocerol synthesis polyketide synthase ppsA. (1911 aa)
	VDBG_00162	Fatty acid synthase S-acetyltransferase. (2166 aa)
	VDBG_01162	Dihydroxyacetone synthase. (715 aa)
	VDBG_00367	cAMP-dependent protein kinase regulatory subunit. (216 aa)
	VDBG_00369	Uncharacterized protein. (222 aa)
	VDBG_00397	Uncharacterized protein. (874 aa)
	VDBG_00455	Predicted protein. (123 aa)
	VDBG_00580	Conidial yellow pigment biosynthesis polyketide synthase. (2005 aa)
	VDBG_00638	Transketolase. (591 aa)
	VDBG_01329	Lovastatin nonaketide synthase. (1364 aa)
	VDBG_00792	Long-chain-fatty-acid-CoA ligase. (615 aa)
	VDBG_00835	Adiponectin receptor protein. (346 aa)
	VDBG_01378	Predicted protein. (138 aa)
	VDBG_01379	Predicted protein. (178 aa)
	VDBG_00059	AMPKBI domain-containing protein. (414 aa)
	VDBG_04996	Amt4. (324 aa)
	VDBG_04992	Phenolpthiocerol synthesis polyketide synthase ppsA. (595 aa)
	VDBG_04980	Transaldolase. (336 aa)
	VDBG_03520	Uncharacterized protein. (29 aa)
	VDBG_02791	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (320 aa)
	VDBG_02756	Acetyl-CoA carboxylase. (108 aa)
	VDBG_02755	Acetyl-CoA carboxylase. (1763 aa)
	VDBG_02579	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (302 aa)
	VDBG_02578	Uncharacterized protein. (336 aa)
	VDBG_03354	Phosphoinositide phospholipase C. (663 aa)
	VDBG_01714	Lovastatin nonaketide synthase. (2495 aa)
	VDBG_01693	Lovastatin nonaketide synthase. (1970 aa)
	VDBG_01659	Phosphoinositide phospholipase C. (729 aa)
	VDBG_02160	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (284 aa)
	VDBG_02131	Sugar transport protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (482 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00367	VDBG_00397	C9S5N4	C9S5R4	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein.	0.925
VDBG_00367	VDBG_08817	C9S5N4	C9SV92	cAMP-dependent protein kinase regulatory subunit.	cAMP-dependent protein kinase; Belongs to the protein kinase superfamily.	0.986
VDBG_00367	VDBG_09307	C9S5N4	C9SWN2	cAMP-dependent protein kinase regulatory subunit.	ApbA domain-containing protein.	0.946
VDBG_00397	VDBG_00367	C9S5R4	C9S5N4	Uncharacterized protein.	cAMP-dependent protein kinase regulatory subunit.	0.925
VDBG_00638	VDBG_02160	C9S6N9	C9S9I8	Transketolase.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.983
VDBG_00638	VDBG_03520	C9S6N9	C9SG07	Transketolase.	Uncharacterized protein.	0.699
VDBG_00638	VDBG_04980	C9S6N9	C9SIU8	Transketolase.	Transaldolase.	0.973
VDBG_00638	VDBG_09018	C9S6N9	C9SVU3	Transketolase.	Anhydro-N-acetylmuramic acid kinase.	0.692
VDBG_00792	VDBG_02578	C9S799	C9SE60	Long-chain-fatty-acid-CoA ligase.	Uncharacterized protein.	0.401
VDBG_00792	VDBG_02579	C9S799	C9SE61	Long-chain-fatty-acid-CoA ligase.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.401
VDBG_00792	VDBG_07953	C9S799	C9SSS8	Long-chain-fatty-acid-CoA ligase.	Long-chain-fatty-acid-CoA ligase.	0.903
VDBG_01162	VDBG_02160	C9S5H6	C9S9I8	Dihydroxyacetone synthase.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.839
VDBG_01162	VDBG_03520	C9S5H6	C9SG07	Dihydroxyacetone synthase.	Uncharacterized protein.	0.699
VDBG_01162	VDBG_04980	C9S5H6	C9SIU8	Dihydroxyacetone synthase.	Transaldolase.	0.699
VDBG_01162	VDBG_09018	C9S5H6	C9SVU3	Dihydroxyacetone synthase.	Anhydro-N-acetylmuramic acid kinase.	0.692
VDBG_01659	VDBG_03354	C9SAX6	C9SDZ8	Phosphoinositide phospholipase C.	Phosphoinositide phospholipase C.	0.910
VDBG_01659	VDBG_09770	C9SAX6	C9SXZ5	Phosphoinositide phospholipase C.	Phosphoinositide phospholipase C.	0.900
VDBG_02160	VDBG_00638	C9S9I8	C9S6N9	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Transketolase.	0.983
VDBG_02160	VDBG_01162	C9S9I8	C9S5H6	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Dihydroxyacetone synthase.	0.839
VDBG_02160	VDBG_02791	C9S9I8	C9SET9	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	0.839