STRINGSTRING
VDBG_03610 VDBG_03610 VDBG_04419 VDBG_04419 VDBG_00728 VDBG_00728 VDBG_05144 VDBG_05144 VDBG_00411 VDBG_00411 VDBG_03483 VDBG_03483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_0361026S proteasome non-ATPase regulatory subunit 3. (553 aa)
VDBG_0441930 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family. (232 aa)
VDBG_00728F-box and WD domain-containing protein. (1249 aa)
VDBG_05144Proteasome component C5. (264 aa)
VDBG_00411Uncharacterized protein. (282 aa)
VDBG_03483Uncharacterized protein. (383 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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