STRINGSTRING
VDBG_00906 VDBG_00906 VDBG_00160 VDBG_00160 VDBG_02279 VDBG_02279 VDBG_02292 VDBG_02292 VDBG_02430 VDBG_02430 VDBG_02941 VDBG_02941 VDBG_03116 VDBG_03116 VDBG_03317 VDBG_03317 VDBG_02572 VDBG_02572 VDBG_03973 VDBG_03973 VDBG_04147 VDBG_04147 VDBG_04148 VDBG_04148 VDBG_03798 VDBG_03798 VDBG_04925 VDBG_04925 VDBG_04926 VDBG_04926 VDBG_05077 VDBG_05077 VDBG_06523 VDBG_06523 VDBG_06544 VDBG_06544 VDBG_06634 VDBG_06634 VDBG_07032 VDBG_07032 VDBG_07571 VDBG_07571 VDBG_08726 VDBG_08726 VDBG_09583 VDBG_09583 VDBG_09347 VDBG_09347
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00906ATP-binding cassette transporter abc1. (1267 aa)
VDBG_00160ATP-binding cassette sub-family B member 5. (1226 aa)
VDBG_02279Heavy metal tolerance protein. (671 aa)
VDBG_02292ATP-binding cassette sub-family B member 5. (1045 aa)
VDBG_02430Multidrug resistance protein. (1340 aa)
VDBG_02941Canalicular multispecific organic anion transporter 1. (1404 aa)
VDBG_03116Iron-sulfur clusters transporter ATM1. (685 aa)
VDBG_03317Canalicular multispecific organic anion transporter 1. (1472 aa)
VDBG_02572Multidrug resistance protein. (1249 aa)
VDBG_03973Multidrug resistance protein. (1368 aa)
VDBG_04147ABC transmembrane type-1 domain-containing protein. (467 aa)
VDBG_04148Multidrug resistance-associated protein. (1442 aa)
VDBG_03798ATP-dependent bile acid permease. (1204 aa)
VDBG_04925Leptomycin B resistance protein pmd1. (313 aa)
VDBG_04926Multidrug resistance protein. (744 aa)
VDBG_05077Heavy metal tolerance protein. (324 aa)
VDBG_06523Leptomycin B resistance protein pmd1. (1002 aa)
VDBG_06544ATP-dependent bile acid permease. (1555 aa)
VDBG_06634Multidrug resistance protein. (1013 aa)
VDBG_07032Heavy metal tolerance protein. (1029 aa)
VDBG_07571Canalicular multispecific organic anion transporter 1. (1387 aa)
VDBG_08726Metal resistance protein YCF1. (1583 aa)
VDBG_09583Multidrug resistance protein. (1286 aa)
VDBG_09347ATP-dependent permease MDL2. (693 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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