15 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_07671	Periplasmic beta-glucosidase/beta-xylosidase. (605 aa)
	VDBG_07559	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (818 aa)
	VDBG_05647	Beta-glucosidase. (792 aa)
	VDBG_02246	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (902 aa)
	VDBG_01380	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (1226 aa)
	VDBG_00526	Beta-glucosidase. (794 aa)
	VDBG_09983	Beta-glucosidase. (682 aa)
	VDBG_03292	Thermostable beta-glucosidase B. (516 aa)
	VDBG_08593	Beta-glucosidase. (706 aa)
	VDBG_03273	Periplasmic beta-glucosidase. (781 aa)
	VDBG_03067	Beta-glucosidase. (804 aa)
	VDBG_08570	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (584 aa)
	VDBG_08474	Beta-glucosidase. (816 aa)
	VDBG_08009	Periplasmic beta-glucosidase. (774 aa)
	VDBG_02556	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (920 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00526	VDBG_01380	C9S6A6	C9S7Q4	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.712
VDBG_00526	VDBG_02246	C9S6A6	C9S9S4	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.681
VDBG_00526	VDBG_02556	C9S6A6	C9SDW1	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.699
VDBG_00526	VDBG_03067	C9S6A6	C9SCZ3	Beta-glucosidase.	Beta-glucosidase.	0.676
VDBG_00526	VDBG_03292	C9S6A6	C9SDR3	Beta-glucosidase.	Thermostable beta-glucosidase B.	0.727
VDBG_00526	VDBG_05647	C9S6A6	C9SLH0	Beta-glucosidase.	Beta-glucosidase.	0.680
VDBG_00526	VDBG_07559	C9S6A6	C9SRN4	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.720
VDBG_00526	VDBG_07671	C9S6A6	C9SRZ6	Beta-glucosidase.	Periplasmic beta-glucosidase/beta-xylosidase.	0.650
VDBG_00526	VDBG_08009	C9S6A6	C9SSY4	Beta-glucosidase.	Periplasmic beta-glucosidase.	0.718
VDBG_00526	VDBG_08474	C9S6A6	C9SU53	Beta-glucosidase.	Beta-glucosidase.	0.678
VDBG_00526	VDBG_08570	C9S6A6	C9SUE9	Beta-glucosidase.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.724
VDBG_00526	VDBG_08593	C9S6A6	C9SUH2	Beta-glucosidase.	Beta-glucosidase.	0.681
VDBG_00526	VDBG_09983	C9S6A6	C9SYK8	Beta-glucosidase.	Beta-glucosidase.	0.667
VDBG_01380	VDBG_00526	C9S7Q4	C9S6A6	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.712
VDBG_01380	VDBG_02246	C9S7Q4	C9S9S4	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.713
VDBG_01380	VDBG_02556	C9S7Q4	C9SDW1	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.723
VDBG_01380	VDBG_03067	C9S7Q4	C9SCZ3	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.706
VDBG_01380	VDBG_03292	C9S7Q4	C9SDR3	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Thermostable beta-glucosidase B.	0.715
VDBG_01380	VDBG_05647	C9S7Q4	C9SLH0	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase.	0.703
VDBG_01380	VDBG_07559	C9S7Q4	C9SRN4	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.682