37 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00285	Dual specificity protein kinase pom1. (1340 aa)
	VDBG_00328	Non-specific serine/threonine protein kinase. (713 aa)
	VDBG_00333	Protein kinase byr1; Belongs to the protein kinase superfamily. (353 aa)
	VDBG_01175	Serine/threonine-protein kinase gad8. (507 aa)
	VDBG_00630	Cell division control protein. (1426 aa)
	VDBG_00149	Serine/threonine-protein kinase. (425 aa)
	VDBG_02117	Mitogen-activated protein kinase. (410 aa)
	VDBG_02134	Meiotic mRNA stability protein kinase SSN3. (436 aa)
	VDBG_02174	Protein kinase DC2; Belongs to the protein kinase superfamily. (397 aa)
	VDBG_01488	Serine/threonine-protein kinase ksg1. (851 aa)
	VDBG_01742	Non-specific serine/threonine protein kinase. (600 aa)
	VDBG_01776	BR serine/threonine-protein kinase. (1014 aa)
	VDBG_02628	MAP kinase kinase MKK1/SSP32. (513 aa)
	VDBG_03477	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1048 aa)
	VDBG_04162	CTD kinase subunit alpha. (792 aa)
	VDBG_04181	Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily. (413 aa)
	VDBG_03585	Calcium/calmodulin-dependent protein kinase; Belongs to the protein kinase superfamily. (419 aa)
	VDBG_03742	Serine/threonine-protein kinase chk1. (545 aa)
	VDBG_03801	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (341 aa)
	VDBG_04703	Serine/threonine-protein kinase nak1. (879 aa)
	VDBG_04887	Serine/threonine-protein kinase psk1. (521 aa)
	VDBG_04933	Calcium/calmodulin-dependent protein kinase; Belongs to the protein kinase superfamily. (407 aa)
	VDBG_04396	Mitogen-activated protein kinase. (310 aa)
	VDBG_05244	Serine/threonine-protein kinase nrc-2. (629 aa)
	VDBG_05285	Serine/threonine-protein kinase MAK. (779 aa)
	VDBG_05979	Serine/threonine-protein kinase plo1. (1002 aa)
	VDBG_06063	Serine/threonine-protein kinase ppk18. (1908 aa)
	VDBG_06288	Ran1-like protein kinase. (521 aa)
	VDBG_06290	Serine/threonine-protein kinase prp4. (815 aa)
	VDBG_06364	Serine/threonine-protein kinase cot-1. (658 aa)
	VDBG_06755	Protein kinase byr2. (845 aa)
	VDBG_07358	Serine/threonine-protein kinase KIN4. (855 aa)
	VDBG_06978	Protein tyrosine kinase; Belongs to the protein kinase superfamily. (323 aa)
	VDBG_06991	Cyclin-dependent kinase G-1. (459 aa)
	VDBG_07955	Non-specific serine/threonine protein kinase. (873 aa)
	VDBG_08817	cAMP-dependent protein kinase; Belongs to the protein kinase superfamily. (442 aa)
	VDBG_08831	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (364 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00149	VDBG_06364	C9S8W5	C9SN89	Serine/threonine-protein kinase.	Serine/threonine-protein kinase cot-1.	0.494
VDBG_00285	VDBG_00630	C9S578	C9S6N1	Dual specificity protein kinase pom1.	Cell division control protein.	0.839
VDBG_00285	VDBG_01742	C9S578	C9SB83	Dual specificity protein kinase pom1.	Non-specific serine/threonine protein kinase.	0.636
VDBG_00285	VDBG_05979	C9S578	C9SM55	Dual specificity protein kinase pom1.	Serine/threonine-protein kinase plo1.	0.854
VDBG_00328	VDBG_01488	C9S5E9	C9SAA2	Non-specific serine/threonine protein kinase.	Serine/threonine-protein kinase ksg1.	0.518
VDBG_00328	VDBG_02134	C9S5E9	C9S9G2	Non-specific serine/threonine protein kinase.	Meiotic mRNA stability protein kinase SSN3.	0.465
VDBG_00333	VDBG_02117	C9S5F4	C9S9E5	Protein kinase byr1; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.786
VDBG_00333	VDBG_02628	C9S5F4	C9SEC6	Protein kinase byr1; Belongs to the protein kinase superfamily.	MAP kinase kinase MKK1/SSP32.	0.608
VDBG_00333	VDBG_04396	C9S5F4	C9SJC5	Protein kinase byr1; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.772
VDBG_00333	VDBG_06755	C9S5F4	C9SPD0	Protein kinase byr1; Belongs to the protein kinase superfamily.	Protein kinase byr2.	0.996
VDBG_00333	VDBG_06978	C9S5F4	C9SR66	Protein kinase byr1; Belongs to the protein kinase superfamily.	Protein tyrosine kinase; Belongs to the protein kinase superfamily.	0.589
VDBG_00630	VDBG_00285	C9S6N1	C9S578	Cell division control protein.	Dual specificity protein kinase pom1.	0.839
VDBG_00630	VDBG_01742	C9S6N1	C9SB83	Cell division control protein.	Non-specific serine/threonine protein kinase.	0.929
VDBG_00630	VDBG_05979	C9S6N1	C9SM55	Cell division control protein.	Serine/threonine-protein kinase plo1.	0.960
VDBG_01175	VDBG_01488	C9S5K2	C9SAA2	Serine/threonine-protein kinase gad8.	Serine/threonine-protein kinase ksg1.	0.791
VDBG_01175	VDBG_02117	C9S5K2	C9S9E5	Serine/threonine-protein kinase gad8.	Mitogen-activated protein kinase.	0.455
VDBG_01175	VDBG_04396	C9S5K2	C9SJC5	Serine/threonine-protein kinase gad8.	Mitogen-activated protein kinase.	0.496
VDBG_01175	VDBG_06063	C9S5K2	C9SMD9	Serine/threonine-protein kinase gad8.	Serine/threonine-protein kinase ppk18.	0.407
VDBG_01488	VDBG_00328	C9SAA2	C9S5E9	Serine/threonine-protein kinase ksg1.	Non-specific serine/threonine protein kinase.	0.518
VDBG_01488	VDBG_01175	C9SAA2	C9S5K2	Serine/threonine-protein kinase ksg1.	Serine/threonine-protein kinase gad8.	0.791