STRINGSTRING
VDBG_00556 VDBG_00556 VDBG_00622 VDBG_00622 VDBG_00660 VDBG_00660 VDBG_01352 VDBG_01352 VDBG_00891 VDBG_00891 VDBG_00963 VDBG_00963 VDBG_00021 VDBG_00021 VDBG_01042 VDBG_01042 VDBG_00104 VDBG_00104 VDBG_00157 VDBG_00157 VDBG_00199 VDBG_00199 VDBG_00202 VDBG_00202 VDBG_01101 VDBG_01101 VDBG_02198 VDBG_02198 VDBG_01622 VDBG_01622 VDBG_02495 VDBG_02495 VDBG_01876 VDBG_01876 VDBG_02031 VDBG_02031 VDBG_02946 VDBG_02946 VDBG_02577 VDBG_02577 VDBG_02639 VDBG_02639 VDBG_02643 VDBG_02643 VDBG_02738 VDBG_02738 VDBG_02806 VDBG_02806 VDBG_03874 VDBG_03874 VDBG_03449 VDBG_03449 VDBG_04227 VDBG_04227 VDBG_03641 VDBG_03641 VDBG_03686 VDBG_03686 VDBG_03729 VDBG_03729 VDBG_03756 VDBG_03756 VDBG_03823 VDBG_03823 VDBG_03841 VDBG_03841 VDBG_04642 VDBG_04642 VDBG_04644 VDBG_04644 VDBG_04752 VDBG_04752 VDBG_05796 VDBG_05796 VDBG_05812 VDBG_05812 VDBG_05187 VDBG_05187 VDBG_05197 VDBG_05197 VDBG_05260 VDBG_05260 VDBG_05606 VDBG_05606 VDBG_05885 VDBG_05885 VDBG_06023 VDBG_06023 VDBG_06073 VDBG_06073 VDBG_06160 VDBG_06160 VDBG_06255 VDBG_06255 VDBG_06543 VDBG_06543 VDBG_06606 VDBG_06606 VDBG_06645 VDBG_06645 VDBG_06727 VDBG_06727 VDBG_07043 VDBG_07043 VDBG_07339 VDBG_07339 VDBG_07367 VDBG_07367 VDBG_07396 VDBG_07396 VDBG_06959 VDBG_06959 VDBG_07448 VDBG_07448 VDBG_07457 VDBG_07457 VDBG_07605 VDBG_07605 VDBG_07666 VDBG_07666 VDBG_07946 VDBG_07946 VDBG_08219 VDBG_08219 VDBG_08639 VDBG_08639 VDBG_08815 VDBG_08815 VDBG_09648 VDBG_09648 VDBG_09322 VDBG_09322 VDBG_09362 VDBG_09362 VDBG_09407 VDBG_09407 VDBG_09687 VDBG_09687 VDBG_09725 VDBG_09725 VDBG_09817 VDBG_09817 VDBG_09835 VDBG_09835 VDBG_09933 VDBG_09933 VDBG_10217 VDBG_10217
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00556Chaperone protein dnaJ. (337 aa)
VDBG_00622DNA-binding protein. (317 aa)
VDBG_00660alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (926 aa)
VDBG_01352U-box domain-containing protein. (224 aa)
VDBG_00891Uncharacterized protein. (702 aa)
VDBG_00963Translocation protein SEC62. (397 aa)
VDBG_00021Ubiquitin-conjugating enzyme. (182 aa)
VDBG_01042CUE domain-containing protein. (143 aa)
VDBG_00104Mannosyl-oligosaccharide glucosidase. (487 aa)
VDBG_00157Hsp70 nucleotide exchange factor FES1. (172 aa)
VDBG_00199Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (285 aa)
VDBG_00202Serine/threonine-protein kinase gcn2. (1616 aa)
VDBG_01101Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)
VDBG_02198Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...] (463 aa)
VDBG_01622Eukaryotic translation initiation factor 2 subunit alpha. (313 aa)
VDBG_02495Serine/threonine-protein kinase/endoribonuclease IRE1. (1226 aa)
VDBG_01876Ubiquitin homeostasis protein lub1. (771 aa)
VDBG_02031Uncharacterized protein. (66 aa)
VDBG_02946PRKCSH domain-containing protein. (538 aa)
VDBG_02577Nucleotide excision repair protein RAD23. (394 aa)
VDBG_02639Small COPII coat GTPase SAR1; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
VDBG_02643Translocation protein sec63. (642 aa)
VDBG_02738RING finger membrane protein. (1381 aa)
VDBG_02806L-type lectin-like domain-containing protein. (329 aa)
VDBG_03874Heat shock protein SSB1. (485 aa)
VDBG_03449Transport protein sec24. (1054 aa)
VDBG_04227Disulfide-isomerase erp38; Belongs to the protein disulfide isomerase family. (372 aa)
VDBG_03641alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (927 aa)
VDBG_03686Deubiquitination-protection protein dph1. (413 aa)
VDBG_03729Uncharacterized protein. (736 aa)
VDBG_03756Endoplasmic reticulum transmembrane protein. (211 aa)
VDBG_03823Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (290 aa)
VDBG_03841Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (112 aa)
VDBG_04642NPL4. (250 aa)
VDBG_04644NPL4. (342 aa)
VDBG_04752Chaperone protein dnaJ 2. (307 aa)
VDBG_05796Ubiquitin conjugation factor E4. (1102 aa)
VDBG_05812HLJ1. (362 aa)
VDBG_05187Transport protein SEC31. (1007 aa)
VDBG_05197Ubiquitin fusion degradation protein. (374 aa)
VDBG_05260Hsp70-like protein; Belongs to the heat shock protein 70 family. (651 aa)
VDBG_05606Stress protein ORP150. (996 aa)
VDBG_05885Protein disulfide-isomerase. (547 aa)
VDBG_06023alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (512 aa)
VDBG_06073Oligosaccharyl transferase STT3 subunit. (748 aa)
VDBG_06160Nucleotide exchange factor SIL1. (430 aa)
VDBG_06255alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (463 aa)
VDBG_06543Transport protein SEC61 subunit alpha. (308 aa)
VDBG_06606Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
VDBG_06645Chaperone protein dnaJ 2. (421 aa)
VDBG_06727S-phase kinase-associated protein 1A; Belongs to the SKP1 family. (169 aa)
VDBG_07043Dolichyl-diphosphooligosaccharide-protein glycotransferase. (330 aa)
VDBG_07339PNG1. (473 aa)
VDBG_07367alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (462 aa)
VDBG_07396Endoplasmic oxidoreductin-1. (598 aa)
VDBG_06959Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (245 aa)
VDBG_07448Ubiquitin thioesterase OTU1. (299 aa)
VDBG_07457UDP-glucose:glycoprotein glucosyltransferase. (1468 aa)
VDBG_07605UBX domain-containing protein. (416 aa)
VDBG_07666Neutral alpha-glucosidase AB; Belongs to the glycosyl hydrolase 31 family. (652 aa)
VDBG_07946Hsp70-like protein; Belongs to the heat shock protein 70 family. (666 aa)
VDBG_08219Transport protein sec-13; Belongs to the WD repeat SEC13 family. (337 aa)
VDBG_08639RING-box protein. (119 aa)
VDBG_08815Vesicular integral-membrane protein VIP36. (320 aa)
VDBG_09648Glucosidase 2 subunit beta. (560 aa)
VDBG_09322Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (772 aa)
VDBG_09362E3 ubiquitin-protein ligase HRD1. (682 aa)
VDBG_09407Heat shock protein. (651 aa)
VDBG_09687DnaJ and TPR domain-containing protein. (510 aa)
VDBG_09725Transport protein SEC24. (340 aa)
VDBG_09817Thioredoxin domain-containing protein. (378 aa)
VDBG_09835alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (566 aa)
VDBG_09933Disulfide-isomerase A6. (406 aa)
VDBG_10217Cell division cycle protein; Belongs to the AAA ATPase family. (634 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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