STRINGSTRING
VDBG_00338 VDBG_00338 VDBG_00464 VDBG_00464 VDBG_00559 VDBG_00559 VDBG_00734 VDBG_00734 VDBG_00892 VDBG_00892 VDBG_00977 VDBG_00977 VDBG_01030 VDBG_01030 VDBG_01031 VDBG_01031 VDBG_02142 VDBG_02142 VDBG_01496 VDBG_01496 VDBG_01566 VDBG_01566 VDBG_01568 VDBG_01568 VDBG_01611 VDBG_01611 VDBG_01724 VDBG_01724 VDBG_01917 VDBG_01917 VDBG_01928 VDBG_01928 VDBG_01952 VDBG_01952 VDBG_01964 VDBG_01964 VDBG_02863 VDBG_02863 VDBG_03269 VDBG_03269 VDBG_03272 VDBG_03272 VDBG_03394 VDBG_03394 VDBG_03865 VDBG_03865 VDBG_03874 VDBG_03874 VDBG_03495 VDBG_03495 VDBG_04211 VDBG_04211 VDBG_03653 VDBG_03653 VDBG_03677 VDBG_03677 VDBG_04313 VDBG_04313 VDBG_03816 VDBG_03816 VDBG_04585 VDBG_04585 VDBG_04721 VDBG_04721 VDBG_04827 VDBG_04827 VDBG_04956 VDBG_04956 VDBG_05048 VDBG_05048 VDBG_04352 VDBG_04352 VDBG_04422 VDBG_04422 VDBG_05235 VDBG_05235 VDBG_05260 VDBG_05260 VDBG_05269 VDBG_05269 VDBG_05656 VDBG_05656 VDBG_05701 VDBG_05701 VDBG_06021 VDBG_06021 VDBG_06212 VDBG_06212 VDBG_06626 VDBG_06626 VDBG_06744 VDBG_06744 VDBG_07243 VDBG_07243 VDBG_07830 VDBG_07830 VDBG_07951 VDBG_07951 VDBG_07960 VDBG_07960 VDBG_08046 VDBG_08046 VDBG_08078 VDBG_08078 VDBG_08324 VDBG_08324 VDBG_08411 VDBG_08411 VDBG_08501 VDBG_08501 VDBG_08551 VDBG_08551 VDBG_08230 VDBG_08230 VDBG_08260 VDBG_08260 VDBG_08633 VDBG_08633 VDBG_08680 VDBG_08680 VDBG_08700 VDBG_08700 VDBG_09059 VDBG_09059 VDBG_09282 VDBG_09282 VDBG_09300 VDBG_09300 VDBG_09410 VDBG_09410 VDBG_09934 VDBG_09934 VDBG_09968 VDBG_09968
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00338BAR domain-containing protein. (442 aa)
VDBG_00464E3 ubiquitin-protein ligase. (791 aa)
VDBG_00559Vacuolar-sorting protein snf7. (223 aa)
VDBG_00734ADP-ribosylation factor GTPase-activating protein GCS1. (409 aa)
VDBG_00892Phospholipase D2. (829 aa)
VDBG_00977GTPase-activating protein ZNF289. (482 aa)
VDBG_01030DUF292 domain-containing protein. (302 aa)
VDBG_01031AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
VDBG_02142ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (186 aa)
VDBG_01496UBA/TS-N domain-containing protein. (1262 aa)
VDBG_01566Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (130 aa)
VDBG_01568AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family. (723 aa)
VDBG_01611GTP-binding protein SAS1. (229 aa)
VDBG_01724Phospholipase D1. (1713 aa)
VDBG_01917Uncharacterized protein. (205 aa)
VDBG_01928SH3 domain signalling protein. (493 aa)
VDBG_01952Sorting nexin-3. (182 aa)
VDBG_01964Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
VDBG_02863Charged multivesicular body protein. (214 aa)
VDBG_03269Vacuolar protein sorting-associated protein; Belongs to the AAA ATPase family. (404 aa)
VDBG_03272STAM-binding protein. (534 aa)
VDBG_03394Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (200 aa)
VDBG_03865Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (238 aa)
VDBG_03874Heat shock protein SSB1. (485 aa)
VDBG_03495Vacuolar protein-sorting-associated protein. (541 aa)
VDBG_04211GTP-binding protein ypt7. (205 aa)
VDBG_03653GTP-binding protein ypt3. (212 aa)
VDBG_03677Charged multivesicular body protein. (198 aa)
VDBG_04313ESCRT-I component. (525 aa)
VDBG_03816PX domain-containing protein. (391 aa)
VDBG_04585Csx2. (1092 aa)
VDBG_04721Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (319 aa)
VDBG_04827ADP-ribosylation factor. (180 aa)
VDBG_04956F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (154 aa)
VDBG_05048Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1655 aa)
VDBG_04352Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (700 aa)
VDBG_04422Vacuolar protein sorting-associated protein 26B-B. (322 aa)
VDBG_05235Vacuolar protein-sorting-associated protein. (228 aa)
VDBG_05260Hsp70-like protein; Belongs to the heat shock protein 70 family. (651 aa)
VDBG_05269GTP-binding protein RHO1. (129 aa)
VDBG_05656pH-response regulator protein palA/rim-20. (814 aa)
VDBG_05701Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (193 aa)
VDBG_06021Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (363 aa)
VDBG_06212Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (857 aa)
VDBG_06626Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
VDBG_06744Vacuolar protein sorting-associated protein. (246 aa)
VDBG_07243GTP-binding protein ypt5. (241 aa)
VDBG_07830DOA4-independent degradation protein. (201 aa)
VDBG_07951Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (685 aa)
VDBG_07960Stromal membrane-associated protein. (462 aa)
VDBG_08046Vacuolar protein-sorting-associated protein. (161 aa)
VDBG_08078F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (273 aa)
VDBG_08324Uncharacterized protein. (361 aa)
VDBG_08411Phospholipase. (921 aa)
VDBG_08501Transport protein SEC7. (1575 aa)
VDBG_08551VAC1 protein. (675 aa)
VDBG_08230ARF guanine-nucleotide exchange factor 2. (1624 aa)
VDBG_08260Senescence domain-containing protein. (513 aa)
VDBG_08633Vacuolar protein sorting-associated protein; Belongs to the STXBP/unc-18/SEC1 family. (584 aa)
VDBG_08680Predicted protein. (506 aa)
VDBG_08700Cell division control protein. (185 aa)
VDBG_09059AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. (308 aa)
VDBG_09282Class E vacuolar protein-sorting machinery protein HSE1. (690 aa)
VDBG_09300EH domain binding protein epsin 2. (420 aa)
VDBG_09410Vacuolar protein sorting-associated protein vps5. (582 aa)
VDBG_09934Vta1 domain-containing protein. (253 aa)
VDBG_09968Epsin-3. (499 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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