(22 nodes) Mixed, incl. Alpha/beta hydrolase fold-1, and Palmitoyl hydrolase activity network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106510900	Monoacylglycerol lipase ABHD12-like. (98 aa)
	LOC106513863	Alpha/beta hydrolase domain-containing protein 17A-like. (321 aa)
	plin4	Perilipin; Belongs to the perilipin family. (447 aa)
	abhd4	Abhydrolase domain-containing protein 4 isoform X1. (371 aa)
	mylip	E3 ubiquitin-protein ligase MYLIP. (479 aa)
	abhd8	Abhydrolase domain-containing protein 8. (473 aa)
	abhd5	1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X1. (372 aa)
	abhd16a	Abhydrolase domain-containing protein 16A. (543 aa)
	abhd6	Monoacylglycerol lipase ABHD6. (338 aa)
	LOC106522795	LOW QUALITY PROTEIN: patatin-like phospholipase domain-containing protein 2. (212 aa)
	abhd11	Alpha/beta hydrolase domain-containing protein 11. (308 aa)
	LOC106524200	Protein brambleberry-like isoform X1. (647 aa)
	LOC106524767	1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like isoform X1. (360 aa)
	LOC106525594	Monoacylglycerol lipase ABHD12-like. (356 aa)
	LOC106526282	Alpha/beta hydrolase domain-containing protein 17B-like. (360 aa)
	abhd12	Monoacylglycerol lipase ABHD12. (372 aa)
	LOC106531603	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (355 aa)
	gde1	Glycerophosphodiester phosphodiesterase 1. (334 aa)
	LOC106532873	Uncharacterized protein C4orf29 homolog. (449 aa)
	LOC106533067	Abhydrolase domain-containing protein 2-A-like. (439 aa)
	LOC106534700	G0/G1 switch protein 2-like. (112 aa)
	LOC106535626	Ribosome-binding protein 1-like. (244 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106524767	LOC106535626	A0A2I4C2F7	A0A2I4D799	1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like isoform X1.	Ribosome-binding protein 1-like.	0.521
LOC106524767	gde1	A0A2I4C2F7	A0A2I4CU18	1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like isoform X1.	Glycerophosphodiester phosphodiesterase 1.	0.410
LOC106524767	plin4	A0A2I4C2F7	A0A2I4AS78	1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like isoform X1.	Perilipin; Belongs to the perilipin family.	0.543
LOC106532873	abhd11	A0A2I4CWV6	A0A2I4BX73	Uncharacterized protein C4orf29 homolog.	Alpha/beta hydrolase domain-containing protein 11.	0.564
LOC106532873	abhd4	A0A2I4CWV6	A0A2I4AWU2	Uncharacterized protein C4orf29 homolog.	Abhydrolase domain-containing protein 4 isoform X1.	0.444
LOC106532873	abhd8	A0A2I4CWV6	A0A2I4B4V8	Uncharacterized protein C4orf29 homolog.	Abhydrolase domain-containing protein 8.	0.607
LOC106535626	LOC106524767	A0A2I4D799	A0A2I4C2F7	Ribosome-binding protein 1-like.	1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like isoform X1.	0.521
LOC106535626	abhd4	A0A2I4D799	A0A2I4AWU2	Ribosome-binding protein 1-like.	Abhydrolase domain-containing protein 4 isoform X1.	0.521
LOC106535626	abhd5	A0A2I4D799	A0A2I4BF10	Ribosome-binding protein 1-like.	1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X1.	0.521
abhd11	LOC106532873	A0A2I4BX73	A0A2I4CWV6	Alpha/beta hydrolase domain-containing protein 11.	Uncharacterized protein C4orf29 homolog.	0.564
abhd11	abhd16a	A0A2I4BX73	A0A2I4BMA3	Alpha/beta hydrolase domain-containing protein 11.	Abhydrolase domain-containing protein 16A.	0.472
abhd11	abhd6	A0A2I4BX73	A0A2I4BSU7	Alpha/beta hydrolase domain-containing protein 11.	Monoacylglycerol lipase ABHD6.	0.654
abhd11	abhd8	A0A2I4BX73	A0A2I4B4V8	Alpha/beta hydrolase domain-containing protein 11.	Abhydrolase domain-containing protein 8.	0.487
abhd11	mylip	A0A2I4BX73	A0A2I4B0Q6	Alpha/beta hydrolase domain-containing protein 11.	E3 ubiquitin-protein ligase MYLIP.	0.527
abhd12	abhd16a	A0A2I4CGF8	A0A2I4BMA3	Monoacylglycerol lipase ABHD12.	Abhydrolase domain-containing protein 16A.	0.493
abhd12	abhd4	A0A2I4CGF8	A0A2I4AWU2	Monoacylglycerol lipase ABHD12.	Abhydrolase domain-containing protein 4 isoform X1.	0.478
abhd16a	abhd11	A0A2I4BMA3	A0A2I4BX73	Abhydrolase domain-containing protein 16A.	Alpha/beta hydrolase domain-containing protein 11.	0.472
abhd16a	abhd12	A0A2I4BMA3	A0A2I4CGF8	Abhydrolase domain-containing protein 16A.	Monoacylglycerol lipase ABHD12.	0.493
abhd4	LOC106532873	A0A2I4AWU2	A0A2I4CWV6	Abhydrolase domain-containing protein 4 isoform X1.	Uncharacterized protein C4orf29 homolog.	0.444
abhd4	LOC106535626	A0A2I4AWU2	A0A2I4D799	Abhydrolase domain-containing protein 4 isoform X1.	Ribosome-binding protein 1-like.	0.521