20 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cfap53	Cilia- and flagella-associated protein 53. (508 aa)
	ccdc173	Coiled-coil domain-containing protein 173. (546 aa)
	cfap52	Cilia- and flagella-associated protein 52. (617 aa)
	LOC106515706	Uncharacterized protein LOC106515706. (417 aa)
	wdr90	WD repeat-containing protein 90. (1834 aa)
	LOC106518345	Uncharacterized protein C1orf158 homolog isoform X1. (231 aa)
	pacrg	Parkin coregulated gene protein. (225 aa)
	fam183a	Protein FAM183A isoform X1. (142 aa)
	cfap126	Protein Flattop. (203 aa)
	efhb	EF-hand domain-containing family member B. (577 aa)
	ribc1	RIB43A-like with coiled-coils protein 1. (378 aa)
	tekt2	Tektin-2 isoform X1. (510 aa)
	mns1	Meiosis-specific nuclear structural protein 1. (512 aa)
	tekt4	Tektin-4. (444 aa)
	LOC106532304	EF-hand domain-containing family member C2-like. (628 aa)
	tekt3	Tektin-3. (487 aa)
	LOC106536278	EF-hand domain-containing family member C2-like. (423 aa)
	LOC106536478	EF-hand domain-containing protein 1-like. (225 aa)
	cfap45	LOW QUALITY PROTEIN: cilia- and flagella-associated protein 45. (536 aa)
	LOC106537047	RIB43A-like with coiled-coils protein 2 isoform X1. (343 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106515706	LOC106518345	A0A2I4B005	A0A2I4BBH0	Uncharacterized protein LOC106515706.	Uncharacterized protein C1orf158 homolog isoform X1.	0.530
LOC106515706	LOC106532304	A0A2I4B005	A0A2I4CUW9	Uncharacterized protein LOC106515706.	EF-hand domain-containing family member C2-like.	0.622
LOC106515706	LOC106536278	A0A2I4B005	A0A2I4D9M5	Uncharacterized protein LOC106515706.	EF-hand domain-containing family member C2-like.	0.622
LOC106515706	LOC106536478	A0A2I4B005	A0A2I4DAF5	Uncharacterized protein LOC106515706.	EF-hand domain-containing protein 1-like.	0.676
LOC106515706	LOC106537047	A0A2I4B005	A0A2I4DCA8	Uncharacterized protein LOC106515706.	RIB43A-like with coiled-coils protein 2 isoform X1.	0.664
LOC106515706	ccdc173	A0A2I4B005	A0A2I4AN55	Uncharacterized protein LOC106515706.	Coiled-coil domain-containing protein 173.	0.604
LOC106515706	cfap126	A0A2I4B005	A0A2I4BVI6	Uncharacterized protein LOC106515706.	Protein Flattop.	0.661
LOC106515706	cfap45	A0A2I4B005	A0A2I4DAZ4	Uncharacterized protein LOC106515706.	LOW QUALITY PROTEIN: cilia- and flagella-associated protein 45.	0.686
LOC106515706	cfap52	A0A2I4B005	A0A2I4AXR1	Uncharacterized protein LOC106515706.	Cilia- and flagella-associated protein 52.	0.611
LOC106515706	cfap53	A0A2I4B005	A0A2I4AJ97	Uncharacterized protein LOC106515706.	Cilia- and flagella-associated protein 53.	0.607
LOC106515706	efhb	A0A2I4B005	A0A2I4BVT8	Uncharacterized protein LOC106515706.	EF-hand domain-containing family member B.	0.611
LOC106515706	fam183a	A0A2I4B005	A0A2I4BPP1	Uncharacterized protein LOC106515706.	Protein FAM183A isoform X1.	0.607
LOC106515706	mns1	A0A2I4B005	A0A2I4CT67	Uncharacterized protein LOC106515706.	Meiosis-specific nuclear structural protein 1.	0.646
LOC106515706	pacrg	A0A2I4B005	A0A2I4BJX0	Uncharacterized protein LOC106515706.	Parkin coregulated gene protein.	0.620
LOC106515706	ribc1	A0A2I4B005	A0A2I4C3S9	Uncharacterized protein LOC106515706.	RIB43A-like with coiled-coils protein 1.	0.664
LOC106515706	tekt3	A0A2I4B005	A0A2I4D5Y1	Uncharacterized protein LOC106515706.	Tektin-3.	0.718
LOC106515706	tekt4	A0A2I4B005	A0A2I4CTJ1	Uncharacterized protein LOC106515706.	Tektin-4.	0.695
LOC106515706	wdr90	A0A2I4B005	A0A2I4B7C1	Uncharacterized protein LOC106515706.	WD repeat-containing protein 90.	0.520
LOC106518345	LOC106515706	A0A2I4BBH0	A0A2I4B005	Uncharacterized protein C1orf158 homolog isoform X1.	Uncharacterized protein LOC106515706.	0.530
LOC106518345	LOC106532304	A0A2I4BBH0	A0A2I4CUW9	Uncharacterized protein C1orf158 homolog isoform X1.	EF-hand domain-containing family member C2-like.	0.538