5 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wdr90	WD repeat-containing protein 90. (1834 aa)
	pacrg	Parkin coregulated gene protein. (225 aa)
	efhb	EF-hand domain-containing family member B. (577 aa)
	LOC106536278	EF-hand domain-containing family member C2-like. (423 aa)
	LOC106536478	EF-hand domain-containing protein 1-like. (225 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106536278	LOC106536478	A0A2I4D9M5	A0A2I4DAF5	EF-hand domain-containing family member C2-like.	EF-hand domain-containing protein 1-like.	0.651
LOC106536278	efhb	A0A2I4D9M5	A0A2I4BVT8	EF-hand domain-containing family member C2-like.	EF-hand domain-containing family member B.	0.718
LOC106536278	pacrg	A0A2I4D9M5	A0A2I4BJX0	EF-hand domain-containing family member C2-like.	Parkin coregulated gene protein.	0.886
LOC106536278	wdr90	A0A2I4D9M5	A0A2I4B7C1	EF-hand domain-containing family member C2-like.	WD repeat-containing protein 90.	0.900
LOC106536478	LOC106536278	A0A2I4DAF5	A0A2I4D9M5	EF-hand domain-containing protein 1-like.	EF-hand domain-containing family member C2-like.	0.651
LOC106536478	efhb	A0A2I4DAF5	A0A2I4BVT8	EF-hand domain-containing protein 1-like.	EF-hand domain-containing family member B.	0.774
LOC106536478	pacrg	A0A2I4DAF5	A0A2I4BJX0	EF-hand domain-containing protein 1-like.	Parkin coregulated gene protein.	0.890
LOC106536478	wdr90	A0A2I4DAF5	A0A2I4B7C1	EF-hand domain-containing protein 1-like.	WD repeat-containing protein 90.	0.900
efhb	LOC106536278	A0A2I4BVT8	A0A2I4D9M5	EF-hand domain-containing family member B.	EF-hand domain-containing family member C2-like.	0.718
efhb	LOC106536478	A0A2I4BVT8	A0A2I4DAF5	EF-hand domain-containing family member B.	EF-hand domain-containing protein 1-like.	0.774
efhb	pacrg	A0A2I4BVT8	A0A2I4BJX0	EF-hand domain-containing family member B.	Parkin coregulated gene protein.	0.873
efhb	wdr90	A0A2I4BVT8	A0A2I4B7C1	EF-hand domain-containing family member B.	WD repeat-containing protein 90.	0.991
pacrg	LOC106536278	A0A2I4BJX0	A0A2I4D9M5	Parkin coregulated gene protein.	EF-hand domain-containing family member C2-like.	0.886
pacrg	LOC106536478	A0A2I4BJX0	A0A2I4DAF5	Parkin coregulated gene protein.	EF-hand domain-containing protein 1-like.	0.890
pacrg	efhb	A0A2I4BJX0	A0A2I4BVT8	Parkin coregulated gene protein.	EF-hand domain-containing family member B.	0.873
pacrg	wdr90	A0A2I4BJX0	A0A2I4B7C1	Parkin coregulated gene protein.	WD repeat-containing protein 90.	0.995
wdr90	LOC106536278	A0A2I4B7C1	A0A2I4D9M5	WD repeat-containing protein 90.	EF-hand domain-containing family member C2-like.	0.900
wdr90	LOC106536478	A0A2I4B7C1	A0A2I4DAF5	WD repeat-containing protein 90.	EF-hand domain-containing protein 1-like.	0.900
wdr90	efhb	A0A2I4B7C1	A0A2I4BVT8	WD repeat-containing protein 90.	EF-hand domain-containing family member B.	0.991
wdr90	pacrg	A0A2I4B7C1	A0A2I4BJX0	WD repeat-containing protein 90.	Parkin coregulated gene protein.	0.995