(5 nodes) Mixed, incl. Domain of unknown function (DUF4795), and Protein localization to motile cilium network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cfap43	Cilia- and flagella-associated protein 43 isoform X1. (1622 aa)
	LOC106522353	Glutamine-rich protein 2-like. (328 aa)
	LOC106531309	Protein MAATS1-like. (148 aa)
	cfap58	Cilia- and flagella-associated protein 58. (890 aa)
	cfap44	Cilia- and flagella-associated protein 44. (1669 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106522353	cfap43	A0A2I4BSQ1	A0A2I4AQE0	Glutamine-rich protein 2-like.	Cilia- and flagella-associated protein 43 isoform X1.	0.614
LOC106522353	cfap44	A0A2I4BSQ1	A0A2I4CVA8	Glutamine-rich protein 2-like.	Cilia- and flagella-associated protein 44.	0.552
LOC106531309	cfap43	A0A2I4CRH1	A0A2I4AQE0	Protein MAATS1-like.	Cilia- and flagella-associated protein 43 isoform X1.	0.444
LOC106531309	cfap58	A0A2I4CRH1	A0A2I4CTX6	Protein MAATS1-like.	Cilia- and flagella-associated protein 58.	0.404
cfap43	LOC106522353	A0A2I4AQE0	A0A2I4BSQ1	Cilia- and flagella-associated protein 43 isoform X1.	Glutamine-rich protein 2-like.	0.614
cfap43	LOC106531309	A0A2I4AQE0	A0A2I4CRH1	Cilia- and flagella-associated protein 43 isoform X1.	Protein MAATS1-like.	0.444
cfap43	cfap44	A0A2I4AQE0	A0A2I4CVA8	Cilia- and flagella-associated protein 43 isoform X1.	Cilia- and flagella-associated protein 44.	0.561
cfap43	cfap58	A0A2I4AQE0	A0A2I4CTX6	Cilia- and flagella-associated protein 43 isoform X1.	Cilia- and flagella-associated protein 58.	0.563
cfap44	LOC106522353	A0A2I4CVA8	A0A2I4BSQ1	Cilia- and flagella-associated protein 44.	Glutamine-rich protein 2-like.	0.552
cfap44	cfap43	A0A2I4CVA8	A0A2I4AQE0	Cilia- and flagella-associated protein 44.	Cilia- and flagella-associated protein 43 isoform X1.	0.561
cfap58	LOC106531309	A0A2I4CTX6	A0A2I4CRH1	Cilia- and flagella-associated protein 58.	Protein MAATS1-like.	0.404
cfap58	cfap43	A0A2I4CTX6	A0A2I4AQE0	Cilia- and flagella-associated protein 58.	Cilia- and flagella-associated protein 43 isoform X1.	0.563