(131 nodes) Mixed, incl. SAGA-type complex, and Nuclear membrane protein complex network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106511090	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L. (639 aa)
	LOC106511219	Uncharacterized protein LOC106511219. (526 aa)
	LOC106511328	WD repeat-containing protein 17-like. (767 aa)
	LOC106511399	Vegetative cell wall protein gp1-like. (450 aa)
	LOC106511680	Transcription initiation factor TFIID subunit 9-like. (105 aa)
	LOC106511757	FH1/FH2 domain-containing protein 3-like. (345 aa)
	LOC106511925	Uncharacterized protein LOC106511925. (207 aa)
	LOC106512498	Uncharacterized protein LOC106512498. (201 aa)
	LOC106512563	FH1/FH2 domain-containing protein 3-like. (345 aa)
	LOC106512610	Microtubule-actin cross-linking factor 1-like. (130 aa)
	LOC106512621	Nesprin-1-like. (94 aa)
	LOC106513773	Ferric-chelate reductase 1-like. (315 aa)
	LOC106513926	Cell surface A33 antigen-like. (434 aa)
	supt20h	Transcription factor SPT20 homolog isoform X1. (833 aa)
	usp3	Ubiquitin carboxyl-terminal hydrolase. (610 aa)
	tspan11	Tetraspanin. (260 aa)
	LOC106515770	Uncharacterized protein LOC106515770. (857 aa)
	LOC106515771	Uncharacterized protein LOC106515771. (928 aa)
	kat2b	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (792 aa)
	LOC106516052	Kinectin-like. (345 aa)
	brwd3	Bromodomain and WD repeat-containing protein 3. (1773 aa)
	LOC106516901	Collagen alpha-1(XI) chain-like. (1816 aa)
	LOC106517002	C1q-related factor-like. (268 aa)
	fhod3	FH1/FH2 domain-containing protein 3 isoform X1. (1557 aa)
	catip	Ciliogenesis-associated TTC17-interacting protein. (347 aa)
	col7a1	Collagen alpha-1(VII) chain. (3089 aa)
	LOC106518042	Complement C1q-like protein 4. (239 aa)
	LOC106518295	Plakophilin-2-like isoform X1. (956 aa)
	atxn7	Ataxin-7 isoform X1. (922 aa)
	LOC106518540	Vegetative cell wall protein gp1-like. (488 aa)
	supt7l	STAGA complex 65 subunit gamma. (431 aa)
	LOC106518657	Nesprin-1-like. (7546 aa)
	LOC106518674	E3 ubiquitin-protein ligase RNF213-like. (5245 aa)
	LOC106518679	Ubiquitin carboxyl-terminal hydrolase. (522 aa)
	sun1	SUN domain-containing protein 1. (994 aa)
	evpl	Envoplakin. (1770 aa)
	syne1	Nesprin-1 isoform X1. (2590 aa)
	zzz3	ZZ-type zinc finger-containing protein 3 isoform X1. (1019 aa)
	LOC106520784	Putative ferric-chelate reductase 1. (247 aa)
	pkp3	Plakophilin-3. (851 aa)
	tada1	Transcriptional adapter 1. (343 aa)
	LOC106521409	Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (228 aa)
	LOC106521465	NACHT and WD repeat domain-containing protein 2-like. (1674 aa)
	LOC106521587	Microtubule-actin cross-linking factor 1-like. (1490 aa)
	gas2l1	GAS2-like protein 1. (1047 aa)
	LOC106521754	Ataxin-7-like protein 1. (870 aa)
	pkp2	Plakophilin-2 isoform X1. (761 aa)
	megf10	Multiple epidermal growth factor-like domains protein 10. (1102 aa)
	sun2	SUN domain-containing protein 2 isoform X1. (626 aa)
	LOC106522608	Uncharacterized protein LOC106522608. (263 aa)
	LOC106522728	Collagen alpha-1(XI) chain-like. (1736 aa)
	dst	Dystonin isoform X1. (7751 aa)
	tada2b	Transcriptional adapter. (505 aa)
	drap1	Dr1-associated corepressor. (234 aa)
	LOC106523866	Desmoglein-2-like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1441 aa)
	LOC106523867	Desmoglein-2-like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1189 aa)
	col6a3	Collagen alpha-3(VI) chain. (391 aa)
	LOC106524190	Complement C1q tumor necrosis factor-related protein 3-like. (158 aa)
	pkp1	Plakophilin-1. (713 aa)
	LOC106524480	Collagen alpha-1(XVII) chain-like. (1128 aa)
	LOC106524776	Tetraspanin. (254 aa)
	LOC106525008	Plectin-like isoform X1. (5613 aa)
	LOC106525010	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like. (2116 aa)
	trrap	Transformation/transcription domain-associated protein isoform X1; Belongs to the PI3/PI4-kinase family. (3852 aa)
	tada3	Transcriptional adapter 3. (427 aa)
	LOC106525206	Ataxin-7-like protein 2. (754 aa)
	LOC106525700	Uncharacterized protein LOC106525700. (312 aa)
	ppl	Periplakin. (1765 aa)
	btaf1	TATA-binding protein-associated factor 172. (1857 aa)
	LOC106526662	Nesprin-1-like. (8721 aa)
	LOC106526935	Keratin, type I cytoskeletal 13-like; Belongs to the intermediate filament family. (426 aa)
	LOC106527117	Ubiquitin carboxyl-terminal hydrolase. (506 aa)
	LOC106527250	Polyamine-modulated factor 1-binding protein 1-like. (299 aa)
	atxn7l3	Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (356 aa)
	LOC106527521	Uncharacterized protein DDB_G0271670-like. (624 aa)
	LOC106527692	Putative ferric-chelate reductase 1. (432 aa)
	kat2a	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (797 aa)
	LOC106528134	Complement C1q tumor necrosis factor-related protein 3-like. (233 aa)
	LOC106528152	Complement C1q-like protein 2. (219 aa)
	yeats2	YEATS domain-containing protein 2. (1420 aa)
	LOC106528223	SUN domain-containing protein 1-like isoform X1. (854 aa)
	LOC106528609	Proline-rich protein 36-like. (590 aa)
	dr1	Protein Dr1. (177 aa)
	tada2a	Transcriptional adapter. (445 aa)
	rnf213	E3 ubiquitin-protein ligase RNF213. (3597 aa)
	LOC106529027	E3 ubiquitin-protein ligase RNF213-like. (712 aa)
	csrp2bp	Cysteine-rich protein 2-binding protein. (788 aa)
	LOC106529116	Microtubule-actin cross-linking factor 1-like. (6870 aa)
	LOC106529120	Microtubule-actin cross-linking factor 1-like. (1649 aa)
	LOC106529122	Microtubule-actin cross-linking factor 1-like. (201 aa)
	col5a3	Collagen alpha-3(V) chain. (1863 aa)
	supt3h	Transcription initiation protein SPT3 homolog. (345 aa)
	LOC106529371	Epiplakin-like. (1739 aa)
	LOC106529375	Plectin-like. (4660 aa)
	eny2	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
	LOC106529520	Fibroin heavy chain-like isoform X1. (662 aa)
	mbip	MAP3K12-binding inhibitory protein 1 isoform X1. (336 aa)
	LOC106530154	Protein Hook homolog 2-like. (753 aa)
	LOC106530236	Collagen alpha-1(XIV) chain-like. (1953 aa)
	LOC106530495	Complement C1q-like protein 2. (240 aa)
	LOC106530496	Nascent polypeptide-associated complex subunit alpha, muscle-specific form-like. (318 aa)
	LOC106530865	FH1/FH2 domain-containing protein 3-like. (1325 aa)
	LOC106530954	PH-interacting protein-like isoform X1. (521 aa)
	LOC106531363	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L. (369 aa)
	LOC106531411	Uncharacterized protein LOC106531411. (8683 aa)
	LOC106531414	Nesprin-2-like. (976 aa)
	LOC106532022	Nesprin-2-like. (1117 aa)
	LOC106532021	Nesprin-2-like. (1246 aa)
	zbtb8b	Zinc finger and BTB domain-containing protein 8B. (527 aa)
	LOC106532294	Complement C1q-like protein 4. (207 aa)
	LOC106532306	Mucin-2-like. (364 aa)
	LOC106533070	Coagulation factor V-like isoform X1. (199 aa)
	LOC106533332	Transmembrane 4 L6 family member 5-like. (201 aa)
	dsp	Desmoplakin. (2736 aa)
	LOC106534046	Desmoglein-2-like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1083 aa)
	LOC106534055	Desmocollin-2-like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (885 aa)
	LOC106534094	Coiled-coil domain-containing protein 171-like. (1133 aa)
	LOC106534406	Leucine-rich repeat extensin-like protein 5. (345 aa)
	LOC106534478	Kazrin-like isoform X1. (851 aa)
	LOC106534595	Ataxin-7-like protein 2. (765 aa)
	cd151	Tetraspanin. (259 aa)
	LOC106534905	Growth arrest-specific protein 2-like. (463 aa)
	LOC106534990	P53 apoptosis effector related to PMP-22-like. (184 aa)
	LOC106535415	LWamide neuropeptides-like. (174 aa)
	sgf29	SAGA-associated factor 29 homolog. (290 aa)
	LOC106536151	Collagen alpha-1(XVII) chain-like. (2003 aa)
	LOC106536665	Uncharacterized protein LOC106536665. (649 aa)
	LOC106536707	Nesprin-2-like. (253 aa)
	LOC106536706	Nesprin-2-like. (738 aa)
	usp49	Ubiquitin carboxyl-terminal hydrolase. (673 aa)
	cecr2	Cat eye syndrome critical region protein 2. (1623 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106511090	LOC106511328	A0A2I4AII5	A0A2I4AJ85	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	WD repeat-containing protein 17-like.	0.496
LOC106511090	LOC106511680	A0A2I4AII5	A0A2I4AK83	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Transcription initiation factor TFIID subunit 9-like.	0.863
LOC106511090	LOC106518679	A0A2I4AII5	A0A2I4BCN6	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ubiquitin carboxyl-terminal hydrolase.	0.720
LOC106511090	LOC106521409	A0A2I4AII5	A0A2I4BNU5	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	0.820
LOC106511090	LOC106521465	A0A2I4AII5	A0A2I4BP05	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	NACHT and WD repeat domain-containing protein 2-like.	0.496
LOC106511090	LOC106521754	A0A2I4AII5	A0A2I4BQ87	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ataxin-7-like protein 1.	0.741
LOC106511090	LOC106525206	A0A2I4AII5	A0A2I4C4B1	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ataxin-7-like protein 2.	0.741
LOC106511090	LOC106527117	A0A2I4AII5	A0A2I4CBH5	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ubiquitin carboxyl-terminal hydrolase.	0.720
LOC106511090	LOC106530954	A0A2I4AII5	A0A2I4CQ68	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	PH-interacting protein-like isoform X1.	0.496
LOC106511090	LOC106531363	A0A2I4AII5	A0A2I4CRQ6	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	0.900
LOC106511090	LOC106534595	A0A2I4AII5	A0A2I4D3C0	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ataxin-7-like protein 2.	0.741
LOC106511090	atxn7	A0A2I4AII5	A0A2I4BC78	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ataxin-7 isoform X1.	0.741
LOC106511090	atxn7l3	A0A2I4AII5	A0A2I4CCK4	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	0.820
LOC106511090	brwd3	A0A2I4AII5	A0A2I4B380	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Bromodomain and WD repeat-containing protein 3.	0.496
LOC106511090	btaf1	A0A2I4AII5	A0A2I4C9E7	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	TATA-binding protein-associated factor 172.	0.404
LOC106511090	cecr2	A0A2I4AII5	A0A2I4DCD2	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Cat eye syndrome critical region protein 2.	0.730
LOC106511090	eny2	A0A2I4AII5	A0A2I4CJU2	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.909
LOC106511090	kat2a	A0A2I4AII5	A0A2I4CEX4	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.766
LOC106511090	kat2b	A0A2I4AII5	A0A2I4B0H2	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.766
LOC106511090	sgf29	A0A2I4AII5	A0A2I4D7C9	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.	SAGA-associated factor 29 homolog.	0.926