(5 nodes) SAMP Motif, and Axin-like network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106518754	Axin-2-like isoform X1. (839 aa)
	apc2	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2. (2517 aa)
	axin1	Axin-1. (846 aa)
	gsk3b	Glycogen synthase kinase-3 beta. (138 aa)
	LOC106537373	Adenomatous polyposis coli protein-like. (1835 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106518754	LOC106537373	A0A2I4BCZ7	A0A2I4DD68	Axin-2-like isoform X1.	Adenomatous polyposis coli protein-like.	0.975
LOC106518754	apc2	A0A2I4BCZ7	A0A2I4BIY7	Axin-2-like isoform X1.	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	0.975
LOC106518754	gsk3b	A0A2I4BCZ7	A0A2I4CRH6	Axin-2-like isoform X1.	Glycogen synthase kinase-3 beta.	0.769
LOC106537373	LOC106518754	A0A2I4DD68	A0A2I4BCZ7	Adenomatous polyposis coli protein-like.	Axin-2-like isoform X1.	0.975
LOC106537373	apc2	A0A2I4DD68	A0A2I4BIY7	Adenomatous polyposis coli protein-like.	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	0.900
LOC106537373	axin1	A0A2I4DD68	A0A2I4CGW3	Adenomatous polyposis coli protein-like.	Axin-1.	0.976
LOC106537373	gsk3b	A0A2I4DD68	A0A2I4CRH6	Adenomatous polyposis coli protein-like.	Glycogen synthase kinase-3 beta.	0.712
apc2	LOC106518754	A0A2I4BIY7	A0A2I4BCZ7	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	Axin-2-like isoform X1.	0.975
apc2	LOC106537373	A0A2I4BIY7	A0A2I4DD68	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	Adenomatous polyposis coli protein-like.	0.900
apc2	axin1	A0A2I4BIY7	A0A2I4CGW3	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	Axin-1.	0.976
apc2	gsk3b	A0A2I4BIY7	A0A2I4CRH6	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	Glycogen synthase kinase-3 beta.	0.712
axin1	LOC106537373	A0A2I4CGW3	A0A2I4DD68	Axin-1.	Adenomatous polyposis coli protein-like.	0.976
axin1	apc2	A0A2I4CGW3	A0A2I4BIY7	Axin-1.	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	0.976
axin1	gsk3b	A0A2I4CGW3	A0A2I4CRH6	Axin-1.	Glycogen synthase kinase-3 beta.	0.786
gsk3b	LOC106518754	A0A2I4CRH6	A0A2I4BCZ7	Glycogen synthase kinase-3 beta.	Axin-2-like isoform X1.	0.769
gsk3b	LOC106537373	A0A2I4CRH6	A0A2I4DD68	Glycogen synthase kinase-3 beta.	Adenomatous polyposis coli protein-like.	0.712
gsk3b	apc2	A0A2I4CRH6	A0A2I4BIY7	Glycogen synthase kinase-3 beta.	LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2.	0.712
gsk3b	axin1	A0A2I4CRH6	A0A2I4CGW3	Glycogen synthase kinase-3 beta.	Axin-1.	0.786