(5 nodes) Peptidase family M3, and Sequestering of actin monomers network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106511973	Thimet oligopeptidase-like. (195 aa)
	LOC106528247	Rho GTPase-activating protein SYDE2-like. (1621 aa)
	slc1a7	Amino acid transporter. (579 aa)
	LOC106529836	Gelsolin-like isoform X1. (720 aa)
	LOC106532164	Thimet oligopeptidase-like. (685 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106511973	LOC106528247	A0A2I4AKX4	A0A2I4CFQ6	Thimet oligopeptidase-like.	Rho GTPase-activating protein SYDE2-like.	0.402
LOC106528247	LOC106511973	A0A2I4CFQ6	A0A2I4AKX4	Rho GTPase-activating protein SYDE2-like.	Thimet oligopeptidase-like.	0.402
LOC106528247	LOC106529836	A0A2I4CFQ6	A0A2I4CLF4	Rho GTPase-activating protein SYDE2-like.	Gelsolin-like isoform X1.	0.400
LOC106528247	LOC106532164	A0A2I4CFQ6	A0A2I4CUG5	Rho GTPase-activating protein SYDE2-like.	Thimet oligopeptidase-like.	0.402
LOC106529836	LOC106528247	A0A2I4CLF4	A0A2I4CFQ6	Gelsolin-like isoform X1.	Rho GTPase-activating protein SYDE2-like.	0.400
LOC106532164	LOC106528247	A0A2I4CUG5	A0A2I4CFQ6	Thimet oligopeptidase-like.	Rho GTPase-activating protein SYDE2-like.	0.402