70 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106510767	Annexin A2-like. (305 aa)
	LOC106536968	Synaptotagmin-9-like. (527 aa)
	LOC106535965	Copine-4-like. (539 aa)
	LOC106535273	Synaptotagmin-2-like isoform X1. (434 aa)
	syt11	Synaptotagmin-11. (461 aa)
	syt12	Synaptotagmin-12. (423 aa)
	LOC106533114	Copine-8-like isoform X1. (241 aa)
	LOC106533021	Synaptotagmin-5-like. (496 aa)
	LOC106532436	Copine-2-like. (297 aa)
	LOC106530786	Copine-8-like. (312 aa)
	LOC106530693	Synaptotagmin-7-like isoform X1. (690 aa)
	cpne7	Copine-7. (574 aa)
	LOC106530007	Annexin. (338 aa)
	cpne9	Copine-9. (557 aa)
	LOC106529930	Cytosolic phospholipase A2 gamma-like isoform X1. (526 aa)
	LOC106529932	Cytosolic phospholipase A2 gamma-like. (346 aa)
	syt6	Synaptotagmin-6. (418 aa)
	LOC106527656	Annexin. (347 aa)
	jmjd7	jmjC domain-containing protein 7. (309 aa)
	LOC106527223	Extended synaptotagmin-2-A-like isoform X1. (950 aa)
	LOC106526811	Uncharacterized protein LOC106526811. (422 aa)
	LOC106526801	Annexin. (316 aa)
	LOC106526787	Synaptotagmin-1-like isoform X1. (411 aa)
	anxa10	Annexin. (317 aa)
	anxa5	Annexin. (316 aa)
	LOC106525534	Copine-5-like isoform X1. (573 aa)
	syt4	Synaptotagmin-4 isoform X1. (471 aa)
	LOC106524856	Copine-8. (564 aa)
	LOC106524773	Extended synaptotagmin-1-like. (1080 aa)
	cpne1	Copine-1. (543 aa)
	LOC106522274	Extended synaptotagmin-3-like. (862 aa)
	anxa3	Annexin. (340 aa)
	LOC106521187	Synaptotagmin-7-like isoform X1. (564 aa)
	LOC106521120	Copine-3-like isoform X1. (538 aa)
	LOC106521121	Copine-3-like. (554 aa)
	esyt2	Extended synaptotagmin-2 isoform X1. (901 aa)
	LOC106520336	Protein piccolo-like isoform X1. (7620 aa)
	LOC106520251	Copine-2-like. (547 aa)
	anxa1	Annexin. (340 aa)
	LOC106519286	Synaptotagmin-2-like isoform X1. (431 aa)
	cpne3	Copine-3 isoform X1. (547 aa)
	LOC106518837	synaptotagmin-C-like. (602 aa)
	LOC106518267	Synaptotagmin-1-like isoform X1. (420 aa)
	syt10	Synaptotagmin-10 isoform X1. (551 aa)
	LOC106518246	Synaptotagmin-1-like isoform X1. (422 aa)
	esyt1	Extended synaptotagmin-1. (1823 aa)
	LOC106517435	Synaptotagmin-1-like. (428 aa)
	LOC106517021	Annexin. (505 aa)
	pla2g4a	Phospholipase A2. (749 aa)
	LOC106516557	Synaptotagmin-15-like. (417 aa)
	anxa6	Annexin. (665 aa)
	rnaseh2c	Ribonuclease H2 subunit C. (136 aa)
	cpne4	Copine-4. (554 aa)
	LOC106515547	Annexin. (316 aa)
	LOC106515342	Annexin. (513 aa)
	LOC106514760	Protein piccolo-like isoform X1. (4068 aa)
	prr13	Proline-rich protein 13 isoform X1. (170 aa)
	LOC106514570	Annexin. (337 aa)
	anxa4	Annexin. (320 aa)
	anxa2	Annexin. (352 aa)
	syt1	Synaptotagmin-1. (403 aa)
	c2cd5	C2 domain-containing protein 5 isoform X1. (1143 aa)
	LOC106513639	Major prion protein homolog. (363 aa)
	LOC106513610	Calcium-binding protein P-like. (420 aa)
	LOC106513326	Copine-5-like isoform X1. (460 aa)
	LOC106513186	Synaptotagmin-9-like. (563 aa)
	fam168b	Myelin-associated neurite-outgrowth inhibitor. (200 aa)
	LOC106512211	Synaptotagmin-6-like. (204 aa)
	LOC106512028	Annexin. (235 aa)
	LOC106511860	Annexin. (235 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106510767	LOC106530007	A0A2I4AHI0	A0A2I4CLZ7	Annexin A2-like.	Annexin.	0.929
LOC106510767	anxa2	A0A2I4AHI0	A0A2I4AU89	Annexin A2-like.	Annexin.	0.930
LOC106513186	LOC106517435	A0A2I4APC6	A0A2I4B7M1	Synaptotagmin-9-like.	Synaptotagmin-1-like.	0.446
LOC106513186	LOC106518246	A0A2I4APC6	A0A2I4BAU9	Synaptotagmin-9-like.	Synaptotagmin-1-like isoform X1.	0.445
LOC106513186	LOC106518267	A0A2I4APC6	A0A2I4BB02	Synaptotagmin-9-like.	Synaptotagmin-1-like isoform X1.	0.453
LOC106513186	LOC106519286	A0A2I4APC6	A0A2I4BF17	Synaptotagmin-9-like.	Synaptotagmin-2-like isoform X1.	0.435
LOC106513186	LOC106535273	A0A2I4APC6	A0A2I4D635	Synaptotagmin-9-like.	Synaptotagmin-2-like isoform X1.	0.449
LOC106513186	syt1	A0A2I4APC6	A0A2I4AU13	Synaptotagmin-9-like.	Synaptotagmin-1.	0.425
LOC106514760	LOC106524773	A0A2I4AVW1	A0A2I4C2H4	Protein piccolo-like isoform X1.	Extended synaptotagmin-1-like.	0.576
LOC106516557	LOC106524773	A0A2I4B3X1	A0A2I4C2H4	Synaptotagmin-15-like.	Extended synaptotagmin-1-like.	0.578
LOC106516557	LOC106527223	A0A2I4B3X1	A0A2I4CBX5	Synaptotagmin-15-like.	Extended synaptotagmin-2-A-like isoform X1.	0.579
LOC106517435	LOC106513186	A0A2I4B7M1	A0A2I4APC6	Synaptotagmin-1-like.	Synaptotagmin-9-like.	0.446
LOC106517435	LOC106518267	A0A2I4B7M1	A0A2I4BB02	Synaptotagmin-1-like.	Synaptotagmin-1-like isoform X1.	0.444
LOC106517435	LOC106526811	A0A2I4B7M1	A0A2I4CAE0	Synaptotagmin-1-like.	Uncharacterized protein LOC106526811.	0.566
LOC106517435	LOC106533021	A0A2I4B7M1	A0A2I4CXE9	Synaptotagmin-1-like.	Synaptotagmin-5-like.	0.566
LOC106517435	LOC106536968	A0A2I4B7M1	A0A2I4DC31	Synaptotagmin-1-like.	Synaptotagmin-9-like.	0.446
LOC106517435	syt11	A0A2I4B7M1	A0A2I4D4G1	Synaptotagmin-1-like.	Synaptotagmin-11.	0.566
LOC106517435	syt4	A0A2I4B7M1	A0A2I4C3F2	Synaptotagmin-1-like.	Synaptotagmin-4 isoform X1.	0.566
LOC106518246	LOC106513186	A0A2I4BAU9	A0A2I4APC6	Synaptotagmin-1-like isoform X1.	Synaptotagmin-9-like.	0.445
LOC106518246	LOC106518267	A0A2I4BAU9	A0A2I4BB02	Synaptotagmin-1-like isoform X1.	Synaptotagmin-1-like isoform X1.	0.438