22 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106512599	Laforin-like. (255 aa)
	LOC106528070	Nuclear receptor subfamily 1 group D member 1-like. (570 aa)
	LOC106528136	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (527 aa)
	LOC106528141	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (221 aa)
	LOC106528487	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (705 aa)
	LOC106531156	Protein phosphatase 1 regulatory subunit. (319 aa)
	LOC106535618	Glycogenin-1-like. (407 aa)
	LOC106524682	Nuclear receptor subfamily 1 group D member 1-like. (574 aa)
	LOC106535767	UTP--glucose-1-phosphate uridylyltransferase-like. (376 aa)
	LOC106523907	Glycogen debranching enzyme-like. (1536 aa)
	gyg1	Glycogenin-1. (371 aa)
	acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial. (422 aa)
	gbe1	1,4-alpha-glucan-branching enzyme. (689 aa)
	epm2a	Laforin. (316 aa)
	nhlrc1	E3 ubiquitin-protein ligase NHLRC1. (395 aa)
	LOC106517365	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform-like; Belongs to the protein kinase superfamily. (390 aa)
	phkg1	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily. (394 aa)
	LOC106515061	UTP--glucose-1-phosphate uridylyltransferase-like. (91 aa)
	LOC106513365	Glycogenin-1-like isoform X1. (337 aa)
	ugp2	UTP--glucose-1-phosphate uridylyltransferase. (508 aa)
	ppp1r3c	Protein phosphatase 1 regulatory subunit. (342 aa)
	LOC106510843	Glycogen debranching enzyme-like. (1536 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106510843	LOC106513365	A0A2I4AHR5	A0A2I4AQ41	Glycogen debranching enzyme-like.	Glycogenin-1-like isoform X1.	0.701
LOC106510843	LOC106523907	A0A2I4AHR5	A0A2I4BZ15	Glycogen debranching enzyme-like.	Glycogen debranching enzyme-like.	0.900
LOC106510843	LOC106528136	A0A2I4AHR5	A0A2I4CFA9	Glycogen debranching enzyme-like.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.704
LOC106510843	LOC106528141	A0A2I4AHR5	A0A2I4CFB5	Glycogen debranching enzyme-like.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.704
LOC106510843	LOC106528487	A0A2I4AHR5	A0A2I4CGK5	Glycogen debranching enzyme-like.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.704
LOC106510843	LOC106535618	A0A2I4AHR5	A0A2I4D7B6	Glycogen debranching enzyme-like.	Glycogenin-1-like.	0.701
LOC106510843	LOC106535767	A0A2I4AHR5	A0A2I4D7T5	Glycogen debranching enzyme-like.	UTP--glucose-1-phosphate uridylyltransferase-like.	0.931
LOC106510843	gbe1	A0A2I4AHR5	A0A2I4BKD9	Glycogen debranching enzyme-like.	1,4-alpha-glucan-branching enzyme.	0.980
LOC106510843	gyg1	A0A2I4AHR5	A0A2I4BXS7	Glycogen debranching enzyme-like.	Glycogenin-1.	0.701
LOC106510843	nhlrc1	A0A2I4AHR5	A0A2I4B909	Glycogen debranching enzyme-like.	E3 ubiquitin-protein ligase NHLRC1.	0.438
LOC106510843	ugp2	A0A2I4AHR5	A0A2I4CA86	Glycogen debranching enzyme-like.	UTP--glucose-1-phosphate uridylyltransferase.	0.931
LOC106512599	nhlrc1	A0A2I4AMA6	A0A2I4B909	Laforin-like.	E3 ubiquitin-protein ligase NHLRC1.	0.820
LOC106513365	LOC106510843	A0A2I4AQ41	A0A2I4AHR5	Glycogenin-1-like isoform X1.	Glycogen debranching enzyme-like.	0.701
LOC106513365	LOC106523907	A0A2I4AQ41	A0A2I4BZ15	Glycogenin-1-like isoform X1.	Glycogen debranching enzyme-like.	0.701
LOC106513365	LOC106528136	A0A2I4AQ41	A0A2I4CFA9	Glycogenin-1-like isoform X1.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.982
LOC106513365	LOC106528141	A0A2I4AQ41	A0A2I4CFB5	Glycogenin-1-like isoform X1.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.830
LOC106513365	LOC106528487	A0A2I4AQ41	A0A2I4CGK5	Glycogenin-1-like isoform X1.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.982
LOC106513365	LOC106531156	A0A2I4AQ41	A0A2I4CQY0	Glycogenin-1-like isoform X1.	Protein phosphatase 1 regulatory subunit.	0.537
LOC106513365	LOC106535618	A0A2I4AQ41	A0A2I4D7B6	Glycogenin-1-like isoform X1.	Glycogenin-1-like.	0.903
LOC106513365	LOC106535767	A0A2I4AQ41	A0A2I4D7T5	Glycogenin-1-like isoform X1.	UTP--glucose-1-phosphate uridylyltransferase-like.	0.923