(13 nodes) Regulation of protein kinase A signaling network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106534989	A-kinase anchor protein 6-like. (139 aa)
	LOC106511835	A-kinase anchor protein 6-like. (181 aa)
	mc1r	Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. (328 aa)
	akap12	A-kinase anchor protein 12 isoform X1. (1410 aa)
	akap7	A-kinase anchor protein 7 isoform gamma. (537 aa)
	adgrv1	G-protein coupled receptor 98; Belongs to the G-protein coupled receptor 2 family. (6202 aa)
	LOC106537002	A-kinase anchor protein 6-like. (988 aa)
	LOC106521902	Uncharacterized protein C8orf4 homolog. (100 aa)
	LOC106537016	A-kinase anchor protein 6-like. (166 aa)
	lrrk2	Leucine-rich repeat serine/threonine-protein kinase 2. (2528 aa)
	LOC106528626	A-kinase anchor protein 6-like. (2307 aa)
	LOC106529768	Receptor activity-modifying protein 3-like isoform X1. (165 aa)
	LOC106531533	A-kinase anchor protein 6-like. (970 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106511835	LOC106531533	A0A2I4AKK9	A0A2I4CSB5	A-kinase anchor protein 6-like.	A-kinase anchor protein 6-like.	0.719
LOC106511835	LOC106534989	A0A2I4AKK9	A0A2I4D4V9	A-kinase anchor protein 6-like.	A-kinase anchor protein 6-like.	0.629
LOC106511835	LOC106537002	A0A2I4AKK9	A0A2I4DC64	A-kinase anchor protein 6-like.	A-kinase anchor protein 6-like.	0.709
LOC106531533	LOC106511835	A0A2I4CSB5	A0A2I4AKK9	A-kinase anchor protein 6-like.	A-kinase anchor protein 6-like.	0.719
LOC106534989	LOC106511835	A0A2I4D4V9	A0A2I4AKK9	A-kinase anchor protein 6-like.	A-kinase anchor protein 6-like.	0.629
LOC106537002	LOC106511835	A0A2I4DC64	A0A2I4AKK9	A-kinase anchor protein 6-like.	A-kinase anchor protein 6-like.	0.709