(5 nodes) Neural crest cell fate commitment network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106528881	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
	LOC106530112	Endothelin-3-like. (219 aa)
	LOC106528879	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (360 aa)
	ednra	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (437 aa)
	LOC106514699	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (462 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106514699	LOC106530112	A0A2I4AVN4	A0A2I4CMD1	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin-3-like.	0.996
LOC106514699	ednra	A0A2I4AVN4	A0A2I4CD60	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC106530112	LOC106514699	A0A2I4CMD1	A0A2I4AVN4	Endothelin-3-like.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.996
LOC106530112	ednra	A0A2I4CMD1	A0A2I4CD60	Endothelin-3-like.	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.	0.997
ednra	LOC106514699	A0A2I4CD60	A0A2I4AVN4	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.901
ednra	LOC106530112	A0A2I4CD60	A0A2I4CMD1	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.	Endothelin-3-like.	0.997