(10 nodes) Rac protein signal transduction network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	kiaa0355	Uncharacterized protein KIAA0355 homolog. (932 aa)
	nf1	Neurofibromin isoform X1. (2016 aa)
	nisch	Nischarin. (1442 aa)
	wasf1	wiskott-Aldrich syndrome protein family member 1. (559 aa)
	LOC106517728	Allograft inflammatory factor 1-like. (147 aa)
	LOC106515956	Rho-related GTP-binding protein RhoG-like. (191 aa)
	LOC106510881	Uncharacterized protein KIAA0355-like. (276 aa)
	wasf2	wiskott-Aldrich syndrome protein family member 2. (486 aa)
	LOC106535518	Rho-related GTP-binding protein RhoG-like. (191 aa)
	LOC106534650	Neurofibromin. (2131 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106510881	LOC106515956	A0A2I4AHX3	A0A2I4B179	Uncharacterized protein KIAA0355-like.	Rho-related GTP-binding protein RhoG-like.	0.468
LOC106510881	LOC106535518	A0A2I4AHX3	A0A2I4D6W8	Uncharacterized protein KIAA0355-like.	Rho-related GTP-binding protein RhoG-like.	0.468
LOC106515956	LOC106510881	A0A2I4B179	A0A2I4AHX3	Rho-related GTP-binding protein RhoG-like.	Uncharacterized protein KIAA0355-like.	0.468
LOC106515956	LOC106535518	A0A2I4B179	A0A2I4D6W8	Rho-related GTP-binding protein RhoG-like.	Rho-related GTP-binding protein RhoG-like.	0.901
LOC106515956	kiaa0355	A0A2I4B179	A0A2I4CB81	Rho-related GTP-binding protein RhoG-like.	Uncharacterized protein KIAA0355 homolog.	0.468
LOC106535518	LOC106510881	A0A2I4D6W8	A0A2I4AHX3	Rho-related GTP-binding protein RhoG-like.	Uncharacterized protein KIAA0355-like.	0.468
LOC106535518	LOC106515956	A0A2I4D6W8	A0A2I4B179	Rho-related GTP-binding protein RhoG-like.	Rho-related GTP-binding protein RhoG-like.	0.901
LOC106535518	kiaa0355	A0A2I4D6W8	A0A2I4CB81	Rho-related GTP-binding protein RhoG-like.	Uncharacterized protein KIAA0355 homolog.	0.468
kiaa0355	LOC106515956	A0A2I4CB81	A0A2I4B179	Uncharacterized protein KIAA0355 homolog.	Rho-related GTP-binding protein RhoG-like.	0.468
kiaa0355	LOC106535518	A0A2I4CB81	A0A2I4D6W8	Uncharacterized protein KIAA0355 homolog.	Rho-related GTP-binding protein RhoG-like.	0.468