STRINGSTRING
LOC106532995 LOC106532995 LOC106534713 LOC106534713 rabggta rabggta LOC106534712 LOC106534712 LOC106512072 LOC106512072 pggt1b pggt1b fnta fnta rabggtb rabggtb LOC106531769 LOC106531769 LOC106532993 LOC106532993
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106532995Rab proteins geranylgeranyltransferase component A 1-like. (94 aa)
LOC106534713Zinc finger RNA-binding protein. (521 aa)
rabggtaGeranylgeranyl transferase type-2 subunit alpha. (584 aa)
LOC106534712Zinc finger RNA-binding protein-like isoform X1. (1038 aa)
LOC106512072Rab proteins geranylgeranyltransferase component A 1-like. (489 aa)
pggt1bGeranylgeranyl transferase type-1 subunit beta. (367 aa)
fntaProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (373 aa)
rabggtbGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (331 aa)
LOC106531769Zinc finger RNA-binding protein-like. (818 aa)
LOC106532993Rab proteins geranylgeranyltransferase component A 1-like. (347 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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