22 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106518493	Protein transport protein Sec61 subunit alpha-like 1. (476 aa)
	LOC106518002	Protein transport protein Sec61 subunit alpha-like. (476 aa)
	tmem97	Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (155 aa)
	LOC106512599	Laforin-like. (255 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	LOC106526625	Ribonuclease ZC3H12A-like. (593 aa)
	srpr	Signal recognition particle receptor subunit alpha. (654 aa)
	LOC106530324	Macoilin-1-like. (643 aa)
	pi4kb	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family. (967 aa)
	ccdc47	Coiled-coil domain-containing protein 47. (488 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	LOC106526949	Macoilin-1-like isoform X1. (676 aa)
	rps28	40S ribosomal protein S28. (69 aa)
	srprb	Signal recognition particle receptor subunit beta. (266 aa)
	LOC106532486	Phosphatidylinositol 4-kinase beta-like; Belongs to the PI3/PI4-kinase family. (842 aa)
	LOC106534254	SUN domain-containing ossification factor-like. (1294 aa)
	LOC106536002	Ribonuclease ZC3H12A-like. (422 aa)
	LOC106536544	Macoilin-2-like. (683 aa)
	LOC106521299	SUN domain-containing ossification factor-like. (1245 aa)
	sec63	Translocation protein SEC63 homolog. (755 aa)
	epm2a	Laforin. (316 aa)
	rps29	40S ribosomal protein S29. (56 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106518002	LOC106518493	A0A2I4B9V8	A0A2I4BBX5	Protein transport protein Sec61 subunit alpha-like.	Protein transport protein Sec61 subunit alpha-like 1.	0.900
LOC106518002	ccdc47	A0A2I4B9V8	A0A2I4CKC8	Protein transport protein Sec61 subunit alpha-like.	Coiled-coil domain-containing protein 47.	0.751
LOC106518002	rpl27	A0A2I4B9V8	A0A2I4C2M5	Protein transport protein Sec61 subunit alpha-like.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.796
LOC106518002	rps28	A0A2I4B9V8	A0A2I4CRJ3	Protein transport protein Sec61 subunit alpha-like.	40S ribosomal protein S28.	0.561
LOC106518002	rps29	A0A2I4B9V8	A0A2I4BCC2	Protein transport protein Sec61 subunit alpha-like.	40S ribosomal protein S29.	0.896
LOC106518002	sec61b	A0A2I4B9V8	A0A2I4CBE3	Protein transport protein Sec61 subunit alpha-like.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.994
LOC106518002	sec63	A0A2I4B9V8	A0A2I4BI89	Protein transport protein Sec61 subunit alpha-like.	Translocation protein SEC63 homolog.	0.997
LOC106518002	srpr	A0A2I4B9V8	A0A2I4C607	Protein transport protein Sec61 subunit alpha-like.	Signal recognition particle receptor subunit alpha.	0.856
LOC106518002	srprb	A0A2I4B9V8	A0A2I4CYH1	Protein transport protein Sec61 subunit alpha-like.	Signal recognition particle receptor subunit beta.	0.643
LOC106518493	LOC106518002	A0A2I4BBX5	A0A2I4B9V8	Protein transport protein Sec61 subunit alpha-like 1.	Protein transport protein Sec61 subunit alpha-like.	0.900
LOC106518493	ccdc47	A0A2I4BBX5	A0A2I4CKC8	Protein transport protein Sec61 subunit alpha-like 1.	Coiled-coil domain-containing protein 47.	0.751
LOC106518493	rpl27	A0A2I4BBX5	A0A2I4C2M5	Protein transport protein Sec61 subunit alpha-like 1.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.796
LOC106518493	rps28	A0A2I4BBX5	A0A2I4CRJ3	Protein transport protein Sec61 subunit alpha-like 1.	40S ribosomal protein S28.	0.561
LOC106518493	rps29	A0A2I4BBX5	A0A2I4BCC2	Protein transport protein Sec61 subunit alpha-like 1.	40S ribosomal protein S29.	0.896
LOC106518493	sec61b	A0A2I4BBX5	A0A2I4CBE3	Protein transport protein Sec61 subunit alpha-like 1.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.994
LOC106518493	sec63	A0A2I4BBX5	A0A2I4BI89	Protein transport protein Sec61 subunit alpha-like 1.	Translocation protein SEC63 homolog.	0.997
LOC106518493	srpr	A0A2I4BBX5	A0A2I4C607	Protein transport protein Sec61 subunit alpha-like 1.	Signal recognition particle receptor subunit alpha.	0.856
LOC106518493	srprb	A0A2I4BBX5	A0A2I4CYH1	Protein transport protein Sec61 subunit alpha-like 1.	Signal recognition particle receptor subunit beta.	0.643
LOC106521299	ccdc47	A0A2I4BNF3	A0A2I4CKC8	SUN domain-containing ossification factor-like.	Coiled-coil domain-containing protein 47.	0.403
LOC106532486	pi4kb	A0A2I4CVH8	A0A2I4CKV0	Phosphatidylinositol 4-kinase beta-like; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	0.901