STRINGSTRING
rrs1 rrs1 LOC106510896 LOC106510896 LOC106511025 LOC106511025 LOC106511123 LOC106511123 LOC106511350 LOC106511350 LOC106511517 LOC106511517 LOC106511557 LOC106511557 gpn2 gpn2 LOC106511650 LOC106511650 LOC106511762 LOC106511762 LOC106511761 LOC106511761 LOC106511756 LOC106511756 LOC106511993 LOC106511993 LOC106512121 LOC106512121 LOC106512150 LOC106512150 LOC106512248 LOC106512248 LOC106512455 LOC106512455 nup62 nup62 bbs4 bbs4 LOC106513128 LOC106513128 kpna1 kpna1 gpn3 gpn3 ipo11 ipo11 lmnb1 lmnb1 LOC106513899 LOC106513899 LOC106513901 LOC106513901 uspl1 uspl1 LOC106514211 LOC106514211 LOC106514337 LOC106514337 nup155 nup155 LOC106514623 LOC106514623 ipo9 ipo9 txnip txnip banp banp nup153 nup153 eif4enif1 eif4enif1 pola2 pola2 nup54 nup54 nup188 nup188 ran ran fam53b fam53b tpr tpr LOC106516822 LOC106516822 LOC106516847 LOC106516847 med1 med1 tmco6 tmco6 nup214 nup214 ciz1 ciz1 diexf diexf msx1 msx1 supt7l supt7l sun1 sun1 LOC106519010 LOC106519010 gckr gckr plrg1 plrg1 ranbp2 ranbp2 kpna3 kpna3 nutf2 nutf2 LOC106520280 LOC106520280 LOC106520340 LOC106520340 tnpo2 tnpo2 rangap1 rangap1 rrp7a rrp7a asun asun LOC106521997 LOC106521997 nup85 nup85 gltscr2 gltscr2 nol8 nol8 sun2 sun2 taf3 taf3 LOC106523874 LOC106523874 LOC106523857 LOC106523857 ing1 ing1 LOC106524307 LOC106524307 pom121 pom121 pinx1 pinx1 LOC106524922 LOC106524922 arl2 arl2 sec13 sec13 appl1 appl1 rpain rpain LOC106525685 LOC106525685 lrrk2 lrrk2 LOC106526335 LOC106526335 rap1gds1 rap1gds1 nf1 nf1 appl2 appl2 stk11 stk11 heatr3 heatr3 bard1 bard1 abra abra LOC106527818 LOC106527818 lmna lmna kpnb1 kpnb1 LOC106528223 LOC106528223 adgrd1 adgrd1 LOC106528345 LOC106528345 xpa xpa kpna2 kpna2 LOC106528725 LOC106528725 rpl11 rpl11 LOC106529612 LOC106529612 LOC106529613 LOC106529613 ipo5 ipo5 LOC106529784 LOC106529784 ppp3r1 ppp3r1 LOC106530099 LOC106530099 morc3 morc3 LOC106530661 LOC106530661 ipo4 ipo4 ipo7 ipo7 LOC106531103 LOC106531103 nup133 nup133 kpna6 kpna6 ing2 ing2 LOC106531499 LOC106531499 kpna4 kpna4 LOC106532104 LOC106532104 LOC106532103 LOC106532103 LOC106532374 LOC106532374 tsc2 tsc2 LOC106532737 LOC106532737 spg11 spg11 ipo8 ipo8 sqstm1 sqstm1 cdk5 cdk5 snupn snupn LOC106534003 LOC106534003 rpf2 rpf2 LOC106534272 LOC106534272 LOC106534650 LOC106534650 nup35 nup35 LOC106534873 LOC106534873 nup50 nup50 LOC106535160 LOC106535160 LOC106535441 LOC106535441 nup107 nup107 smo smo LOC106536373 LOC106536373 LOC106536463 LOC106536463 arl2bp arl2bp nup93 nup93 xpo1 xpo1 LOC106537113 LOC106537113 LOC106537244 LOC106537244 LOC106537263 LOC106537263 LOC106537261 LOC106537261
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rrs1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (354 aa)
LOC106510896Transportin-3 isoform X1. (923 aa)
LOC106511025NF-kappa-B inhibitor alpha-like. (318 aa)
LOC106511123Rap1 GTPase-GDP dissociation stimulator 1-like. (307 aa)
LOC106511350Nuclear pore complex protein Nup98-Nup96-like. (951 aa)
LOC106511517Nuclear pore complex protein Nup133-like. (510 aa)
LOC106511557Protein FAM53C-like. (471 aa)
gpn2GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (314 aa)
LOC106511650Nuclear pore complex protein Nup133-like. (480 aa)
LOC106511762Nuclear pore complex protein Nup98-Nup96-like. (208 aa)
LOC106511761Nuclear pore complex protein Nup98-Nup96-like. (318 aa)
LOC106511756Nuclear pore complex protein Nup98-Nup96-like. (212 aa)
LOC106511993Nucleoprotein TPR-like isoform X1. (313 aa)
LOC106512121NTF2-related export protein 2-like. (143 aa)
LOC106512150Uncharacterized protein LOC106512150. (348 aa)
LOC106512248Importin-4-like. (227 aa)
LOC106512455Uncharacterized protein LOC106512455. (462 aa)
nup62Nuclear pore glycoprotein p62. (535 aa)
bbs4Bardet-Biedl syndrome 4 protein. (534 aa)
LOC106513128Protein FAM53B-like. (447 aa)
kpna1Importin subunit alpha; Belongs to the importin alpha family. (539 aa)
gpn3GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (283 aa)
ipo11LOW QUALITY PROTEIN: importin-11. (975 aa)
lmnb1lamin-B1; Belongs to the intermediate filament family. (583 aa)
LOC106513899torsin-1A-interacting protein 2-like isoform X1. (517 aa)
LOC106513901torsin-1A-interacting protein 2-like isoform X1. (483 aa)
uspl1SUMO-specific isopeptidase USPL1. (1165 aa)
LOC106514211Actin-binding Rho-activating protein-like. (176 aa)
LOC106514337Rap1 GTPase-GDP dissociation stimulator 1-like. (456 aa)
nup155Nuclear pore complex protein Nup155. (1367 aa)
LOC10651462314-3-3 protein epsilon; Belongs to the 14-3-3 family. (257 aa)
ipo9Importin-9. (1042 aa)
txnipThioredoxin-interacting protein. (397 aa)
banpProtein BANP isoform X1. (512 aa)
nup153Nuclear pore complex protein Nup153. (1491 aa)
eif4enif1Eukaryotic translation initiation factor 4E transporter isoform X1. (926 aa)
pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (601 aa)
nup54Nucleoporin p54 isoform X1. (580 aa)
nup188Nucleoporin NUP188 homolog isoform X1. (1750 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (219 aa)
fam53bProtein FAM53B isoform X1. (412 aa)
tprNucleoprotein TPR. (1975 aa)
LOC106516822Nucleoprotein TPR-like. (369 aa)
LOC106516847Importin-13-like. (1025 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1785 aa)
tmco6Transmembrane and coiled-coil domain-containing protein 6. (498 aa)
nup214Nuclear pore complex protein Nup214 isoform X1. (1978 aa)
ciz1Cip1-interacting zinc finger protein isoform X1. (746 aa)
diexfDigestive organ expansion factor homolog. (749 aa)
msx1Homeobox protein MSX-1. (287 aa)
supt7lSTAGA complex 65 subunit gamma. (431 aa)
sun1SUN domain-containing protein 1. (994 aa)
LOC106519010Pituitary tumor-transforming gene 1 protein-interacting protein-like. (177 aa)
gckrGlucokinase regulatory protein. (539 aa)
plrg1Pleiotropic regulator 1. (513 aa)
ranbp2E3 SUMO-protein ligase RanBP2. (3036 aa)
kpna3Importin subunit alpha; Belongs to the importin alpha family. (521 aa)
nutf2Nuclear transport factor 2. (127 aa)
LOC106520280Homeobox protein MSX-2-like. (245 aa)
LOC106520340Torsin. (337 aa)
tnpo2Transportin-2. (883 aa)
rangap1Ran GTPase-activating protein 1 isoform X1. (588 aa)
rrp7aRibosomal RNA-processing protein 7 homolog A. (282 aa)
asunProtein asunder homolog isoform X1. (704 aa)
LOC106521997Akirin-2-like. (181 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
gltscr2Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (461 aa)
nol8Nucleolar protein 8. (1099 aa)
sun2SUN domain-containing protein 2 isoform X1. (626 aa)
taf3Transcription initiation factor TFIID subunit 3. (941 aa)
LOC106523874Importin subunit alpha; Belongs to the importin alpha family. (523 aa)
LOC106523857lamin-B2-like; Belongs to the intermediate filament family. (578 aa)
ing1Inhibitor of growth protein. (300 aa)
LOC106524307ELAV-like protein; Belongs to the RRM elav family. (327 aa)
pom121Nuclear envelope pore membrane protein POM 121. (1110 aa)
pinx1PIN2/TERF1-interacting telomerase inhibitor 1 isoform X2. (383 aa)
LOC106524922Nucleoprotein TPR-like isoform X1. (2502 aa)
arl2ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)
sec13Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (320 aa)
appl1LOW QUALITY PROTEIN: DCC-interacting protein 13-alpha. (709 aa)
rpainRPA-interacting protein. (229 aa)
LOC106525685Akirin-2-like. (178 aa)
lrrk2Leucine-rich repeat serine/threonine-protein kinase 2. (2528 aa)
LOC106526335NF-kappa-B inhibitor alpha-like. (307 aa)
rap1gds1Rap1 GTPase-GDP dissociation stimulator 1. (607 aa)
nf1Neurofibromin isoform X1. (2016 aa)
appl2DCC-interacting protein 13-beta. (665 aa)
stk11Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily. (438 aa)
heatr3HEAT repeat-containing protein 3. (677 aa)
bard1BRCA1-associated RING domain protein 1. (788 aa)
abraActin-binding Rho-activating protein. (395 aa)
LOC106527818Cip1-interacting zinc finger protein-like. (423 aa)
lmnaLamin isoform X1; Belongs to the intermediate filament family. (636 aa)
kpnb1Importin subunit beta-1. (876 aa)
LOC106528223SUN domain-containing protein 1-like isoform X1. (854 aa)
adgrd1Adhesion G-protein coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (915 aa)
LOC106528345Importin subunit alpha; Belongs to the importin alpha family. (492 aa)
xpaDNA repair protein complementing XP-A cells. (270 aa)
kpna2Importin subunit alpha; Belongs to the importin alpha family. (512 aa)
LOC106528725Actin-binding Rho-activating protein-like. (358 aa)
rpl1160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
LOC106529612Importin-13-like. (82 aa)
LOC106529613Importin-13-like. (530 aa)
ipo5Importin-5. (1093 aa)
LOC106529784Adapter protein CIKS-like. (391 aa)
ppp3r1Calcineurin subunit B type 1. (170 aa)
LOC106530099lamin-A-like; Belongs to the intermediate filament family. (641 aa)
morc3MORC family CW-type zinc finger protein 3 isoform X1. (1018 aa)
LOC106530661Importin subunit alpha; Belongs to the importin alpha family. (536 aa)
ipo4Importin-4. (1089 aa)
ipo7Importin-7. (1039 aa)
LOC106531103Transportin-2 isoform X1. (891 aa)
nup133Nuclear pore complex protein Nup133. (1137 aa)
kpna6Importin subunit alpha; Belongs to the importin alpha family. (538 aa)
ing2Inhibitor of growth protein. (276 aa)
LOC106531499Transportin-1 isoform X1. (890 aa)
kpna4Importin subunit alpha; Belongs to the importin alpha family. (520 aa)
LOC106532104Nuclear pore complex protein Nup98-Nup96-like. (90 aa)
LOC106532103Nuclear pore complex protein Nup98-Nup96-like. (1631 aa)
LOC106532374Telomerase Cajal body protein 1-like. (545 aa)
tsc2Tuberin. (1863 aa)
LOC10653273714-3-3 protein epsilon-like; Belongs to the 14-3-3 family. (255 aa)
spg11Spatacsin. (2380 aa)
ipo8Importin-8. (1015 aa)
sqstm1Sequestosome-1 isoform X1. (423 aa)
cdk5Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)
snupnSnurportin-1 isoform X1. (377 aa)
LOC106534003Serine/threonine-protein kinase DCLK3-like. (813 aa)
rpf2Ribosome production factor 2 homolog. (307 aa)
LOC106534272Protein Hikeshi. (220 aa)
LOC106534650Neurofibromin. (2131 aa)
nup35Nucleoporin NUP53. (280 aa)
LOC106534873LOW QUALITY PROTEIN: 1-phosphatidylinositol 3-phosphate 5-kinase-like. (2072 aa)
nup50Nuclear pore complex protein Nup50. (443 aa)
LOC106535160Protein FAM53C-like. (398 aa)
LOC1065354411-phosphatidylinositol 3-phosphate 5-kinase-like isoform X1. (1354 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (906 aa)
smoSmoothened homolog; Belongs to the G-protein coupled receptor Fz/Smo family. (813 aa)
LOC106536373HEAT repeat-containing protein 3-like. (330 aa)
LOC106536463Charged multivesicular body protein 4c-like. (154 aa)
arl2bpADP-ribosylation factor-like protein 2-binding protein. (186 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
xpo1Exportin-1. (1071 aa)
LOC106537113Thioredoxin-interacting protein-like. (173 aa)
LOC106537244Importin subunit alpha-6-like. (337 aa)
LOC106537263Importin-13-like. (966 aa)
LOC106537261ELAV-like protein; Belongs to the RRM elav family. (359 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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