STRINGSTRING
LOC106520551 LOC106520551 LOC106511033 LOC106511033 LOC106511583 LOC106511583 LOC106511623 LOC106511623 LOC106512865 LOC106512865 sp9 sp9 dkk1 dkk1 LOC106513686 LOC106513686 LOC106513759 LOC106513759 LOC106513765 LOC106513765 LOC106514418 LOC106514418 LOC106514439 LOC106514439 fbxw4 fbxw4 bcl2l11 bcl2l11 LOC106516406 LOC106516406 med1 med1 lef1 lef1 frem3 frem3 LOC106517262 LOC106517262 ift140 ift140 LOC106517737 LOC106517737 atrx atrx msx1 msx1 en1 en1 sfrp2 sfrp2 LOC106520132 LOC106520132 pkdcc pkdcc LOC106521536 LOC106521536 LOC106521729 LOC106521729 LOC106521856 LOC106521856 iqce iqce LOC106524552 LOC106524552 alx3 alx3 sema3c sema3c LOC106526174 LOC106526174 fgf4 fgf4 LOC106526563 LOC106526563 wdpcp wdpcp sall3 sall3 rpgrip1l rpgrip1l mks1 mks1 LOC106529576 LOC106529576 ift52 ift52 LOC106530483 LOC106530483 LOC106530493 LOC106530493 LOC106532567 LOC106532567 znf48 znf48 LOC106534548 LOC106534548 tbx3 tbx3 sall1 sall1 wdr19 wdr19 LOC106535980 LOC106535980 LOC106536003 LOC106536003 LOC106537175 LOC106537175 LOC106537309 LOC106537309
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106520551FRAS1-related extracellular matrix protein 2-like. (2291 aa)
LOC106511033Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (192 aa)
LOC106511583Intraflagellar transport protein 140 homolog. (700 aa)
LOC106511623T-box transcription factor TBX5-like. (156 aa)
LOC106512865Mitogen-activated protein kinase kinase kinase MLT isoform X1. (797 aa)
sp9Transcription factor Sp9. (439 aa)
dkk1Dickkopf-related protein 1. (252 aa)
LOC106513686RING finger protein 165-like isoform X1. (354 aa)
LOC106513759Mothers against decapentaplegic homolog. (510 aa)
LOC106513765T-box transcription factor TBX4-like. (527 aa)
LOC106514418T-box transcription factor TBX3 isoform X1. (283 aa)
LOC106514439Mothers against decapentaplegic homolog. (503 aa)
fbxw4F-box/WD repeat-containing protein 4. (389 aa)
bcl2l11Bcl-2-like protein 11. (235 aa)
LOC106516406Transcriptional regulator ATRX-like isoform X1. (1906 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1785 aa)
lef1Lymphoid enhancer-binding factor 1 isoform X1. (380 aa)
frem3FRAS1-related extracellular matrix protein 3. (3134 aa)
LOC106517262Secreted frizzled-related protein 2-like. (343 aa)
ift140Intraflagellar transport protein 140 homolog. (1445 aa)
LOC106517737Transcription factor Sp8. (458 aa)
atrxTranscriptional regulator ATRX. (2185 aa)
msx1Homeobox protein MSX-1. (287 aa)
en1Homeobox protein engrailed-like. (262 aa)
sfrp2Secreted frizzled-related protein 2. (295 aa)
LOC106520132Gremlin. (182 aa)
pkdccExtracellular tyrosine-protein kinase PKDCC. (487 aa)
LOC106521536FRAS1-related extracellular matrix protein 2-like. (2574 aa)
LOC106521729T-box transcription factor TBX5-like. (458 aa)
LOC106521856Extracellular matrix protein FRAS1-like. (3990 aa)
iqceIQ domain-containing protein E. (715 aa)
LOC106524552Homeobox protein Hox-C10a-like. (342 aa)
alx3Homeobox protein aristaless-like 3. (242 aa)
sema3csemaphorin-3C; Belongs to the semaphorin family. (763 aa)
LOC106526174Serine/threonine-protein kinase 26-like isoform X1. (672 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (227 aa)
LOC106526563Apoptosis regulator BAX-like isoform X1. (203 aa)
wdpcpWD repeat-containing and planar cell polarity effector protein fritz homolog. (744 aa)
sall3Sal-like protein 3. (1332 aa)
rpgrip1lProtein fantom. (1106 aa)
mks1Meckel syndrome type 1 protein. (571 aa)
LOC106529576T-box transcription factor TBX3-like. (391 aa)
ift52Intraflagellar transport protein 52 homolog. (433 aa)
LOC106530483Growth arrest-specific protein 1-like. (249 aa)
LOC106530493Homeobox protein engrailed-like. (263 aa)
LOC106532567T-box transcription factor TBX5-A-like. (524 aa)
znf48Zinc finger protein 48 isoform X1. (1078 aa)
LOC106534548Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (184 aa)
tbx3T-box transcription factor TBX3. (713 aa)
sall1Sal-like protein 1. (1309 aa)
wdr19WD repeat-containing protein 19. (1341 aa)
LOC106535980RING finger protein 165-like. (345 aa)
LOC106536003Aspartyl/asparaginyl beta-hydroxylase-like. (349 aa)
LOC106537175Extracellular matrix protein FRAS1-like. (1685 aa)
LOC106537309Transcriptional regulator ATRX-like. (889 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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