STRINGSTRING
LOC106530132 LOC106530132 ddx55 ddx55 znf330 znf330 LOC106518915 LOC106518915 slc37a4 slc37a4 ercc1 ercc1 trim33 trim33
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106530132Glucose-6-phosphate translocase-like. (450 aa)
ddx55RNA helicase. (590 aa)
znf330Zinc finger protein 330. (320 aa)
LOC106518915E3 ubiquitin-protein ligase TRIM33-like. (356 aa)
slc37a4Glucose-6-phosphate translocase. (429 aa)
ercc1DNA excision repair protein ERCC-1. (354 aa)
trim33E3 ubiquitin-protein ligase TRIM33 isoform X1. (1190 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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