STRINGSTRING
LOC106527434 LOC106527434 LOC106511016 LOC106511016 LOC106512171 LOC106512171 prkra prkra tarbp2 tarbp2 dhx9 dhx9 mecp2 mecp2 LOC106536374 LOC106536374
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106527434Fragile X mental retardation protein 1 homolog. (414 aa)
LOC106511016Interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog. (301 aa)
LOC106512171RISC-loading complex subunit tarbp2-like. (79 aa)
prkraInterferon-inducible double-stranded RNA-dependent protein kinase activator A. (261 aa)
tarbp2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (345 aa)
dhx9ATP-dependent RNA helicase A. (1264 aa)
mecp2methyl-CpG-binding protein 2 isoform X1. (1031 aa)
LOC106536374Fragile X mental retardation protein 1 homolog B-like. (621 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
Server load: low (12%) [HD]