STRINGSTRING
LOC106536374 LOC106536374 larp6 larp6 dhx9 dhx9 LOC106536002 LOC106536002 LOC106534939 LOC106534939 LOC106514548 LOC106514548 mettl16 mettl16 dazap1 dazap1 LOC106520146 LOC106520146 txndc11 txndc11 eprs eprs LOC106526625 LOC106526625 LOC106527434 LOC106527434
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106536374Fragile X mental retardation protein 1 homolog B-like. (621 aa)
larp6La-related protein 6. (705 aa)
dhx9ATP-dependent RNA helicase A. (1264 aa)
LOC106536002Ribonuclease ZC3H12A-like. (422 aa)
LOC106534939Roquin-1-like isoform X1. (1122 aa)
LOC106514548Roquin-2-like isoform X1. (1154 aa)
mettl16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (545 aa)
dazap1DAZ-associated protein 1 isoform X4. (435 aa)
LOC106520146AT-rich interactive domain-containing protein 5B-like. (588 aa)
txndc11Thioredoxin domain-containing protein 11. (851 aa)
eprsBifunctional glutamate/proline--tRNA ligase. (1675 aa)
LOC106526625Ribonuclease ZC3H12A-like. (593 aa)
LOC106527434Fragile X mental retardation protein 1 homolog. (414 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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