(19 nodes) Peptidyl-threonine dephosphorylation network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106535158	Protein phosphatase 1B-like. (468 aa)
	ppm1b	Protein phosphatase 1B. (402 aa)
	LOC106533264	Protein phosphatase 1D-like. (416 aa)
	ppm1f	Protein phosphatase 1F. (443 aa)
	ppm1e	Protein phosphatase 1E. (616 aa)
	LOC106527320	Protein phosphatase 1K, mitochondrial-like isoform X1. (386 aa)
	pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1. (300 aa)
	LOC106523125	Uncharacterized protein LOC106523125. (883 aa)
	pdp1	Pyruvate dehyrogenase phosphatase catalytic subunit 1. (518 aa)
	dusp10	Dual specificity protein phosphatase 10. (471 aa)
	ppm1a	Protein phosphatase 1A. (382 aa)
	pdp2	Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial. (562 aa)
	ppm1k	Protein phosphatase 1K, mitochondrial. (380 aa)
	LOC106516403	Protein phosphatase 1A-like. (430 aa)
	LOC106516454	Protein phosphatase 1D-like isoform X1. (561 aa)
	LOC106515410	Protein phosphatase 1B-like. (274 aa)
	ppm1g	Protein phosphatase 1G. (555 aa)
	LOC106511810	Protein phosphatase 1D-like. (232 aa)
	LOC106535948	Protein phosphatase 1B-like. (158 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106515410	LOC106535948	A0A2I4AYV8	A0A2I4D8J3	Protein phosphatase 1B-like.	Protein phosphatase 1B-like.	0.447
LOC106516403	ppm1a	A0A2I4B365	A0A2I4BNN9	Protein phosphatase 1A-like.	Protein phosphatase 1A.	0.902
LOC106516454	LOC106533264	A0A2I4B3H4	A0A2I4CY85	Protein phosphatase 1D-like isoform X1.	Protein phosphatase 1D-like.	0.908
LOC106533264	LOC106516454	A0A2I4CY85	A0A2I4B3H4	Protein phosphatase 1D-like.	Protein phosphatase 1D-like isoform X1.	0.908
LOC106535158	ppm1b	A0A2I4D5M6	A0A2I4D1U7	Protein phosphatase 1B-like.	Protein phosphatase 1B.	0.901
LOC106535948	LOC106515410	A0A2I4D8J3	A0A2I4AYV8	Protein phosphatase 1B-like.	Protein phosphatase 1B-like.	0.447
ppm1a	LOC106516403	A0A2I4BNN9	A0A2I4B365	Protein phosphatase 1A.	Protein phosphatase 1A-like.	0.902
ppm1b	LOC106535158	A0A2I4D1U7	A0A2I4D5M6	Protein phosphatase 1B.	Protein phosphatase 1B-like.	0.901